Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ABI1P1-201ENST00000603375 1120 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.05□□□□□ -1.76
SCN2BO60939 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN2BO60939 AL136964.1-201ENST00000622038 2990 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN2BO60939 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN2BO60939 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN2BO60939 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
SCN2BO60939 AC068254.2-201ENST00000623938 3577 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN2BO60939 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 AC017002.4-201ENST00000604721 1525 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.05□□□□□ -1.76
SCN2BO60939 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
SCN2BO60939 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SCN2BO60939 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCN2BO60939 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SCN2BO60939 AL139811.1-201ENST00000424779 2299 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 RNA5SP388-201ENST00000362584 119 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 SNORA37-201ENST00000384504 129 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN2BO60939 RBMY2KP-201ENST00000418221 992 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.04□□□□□ -1.76
SCN2BO60939 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.04□□□□□ -1.76
SCN2BO60939 AL356387.2-201ENST00000422272 243 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 AL157831.1-201ENST00000426134 473 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 YWHAEP5-201ENST00000431545 765 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 AL132765.1-201ENST00000434165 553 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 ELOCP18-201ENST00000434209 337 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 GSTA7P-201ENST00000438425 448 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 ELOCP8-201ENST00000439309 332 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 ELOCP15-201ENST00000442090 332 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.04□□□□□ -1.76
SCN2BO60939 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN2BO60939 AC010683.1-201ENST00000473673 378 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 SYT14P1-201ENST00000481459 721 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 AC025554.1-201ENST00000505641 188 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 VWA8P1-201ENST00000510889 176 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.04□□□□□ -1.76
SCN2BO60939 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.04□□□□□ -1.76
SCN2BO60939 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN2BO60939 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.04□□□□□ -1.76
SCN2BO60939 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.04□□□□□ -1.76
SCN2BO60939 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.04□□□□□ -1.76
SCN2BO60939 AC012213.4-201ENST00000606457 354 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 uc_338.13-201ENST00000618243 179 ntBASIC4.04□□□□□ -1.76
SCN2BO60939 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.04□□□□□ -1.76
SCN2BO60939 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.04□□□□□ -1.76
SCN2BO60939 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SCN2BO60939 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCN2BO60939 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SCN2BO60939 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SCN2BO60939 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.04□□□□□ -1.76
SCN2BO60939 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCN2BO60939 AL132640.2-201ENST00000559968 1698 ntBASIC4.03□□□□□ -1.76
SCN2BO60939 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SCN2BO60939 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN2BO60939 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SCN2BO60939 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SCN2BO60939 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SCN2BO60939 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SCN2BO60939 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN2BO60939 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SCN2BO60939 SPATA2P1-201ENST00000431223 2055 ntBASIC4.03□□□□□ -1.76
SCN2BO60939 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SCN2BO60939 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.03□□□□□ -1.76
SCN2BO60939 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN2BO60939 AC103591.2-201ENST00000265259 766 ntBASIC4.03□□□□□ -1.76
SCN2BO60939 MIR129-1-201ENST00000384972 72 ntBASIC4.03□□□□□ -1.76
SCN2BO60939 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SCN2BO60939 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN2BO60939 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.03□□□□□ -1.76
SCN2BO60939 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.03□□□□□ -1.76
SCN2BO60939 EIF1P3-201ENST00000423841 334 ntBASIC4.03□□□□□ -1.76
SCN2BO60939 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.03□□□□□ -1.76
SCN2BO60939 SERPINA7P1-201ENST00000443077 631 ntBASIC4.03□□□□□ -1.76
SCN2BO60939 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.03□□□□□ -1.76
SCN2BO60939 MTND2P28-201ENST00000457540 1044 ntBASIC4.03□□□□□ -1.76
SCN2BO60939 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.03□□□□□ -1.76
SCN2BO60939 RPS27AP16-201ENST00000492222 470 ntBASIC4.03□□□□□ -1.76
SCN2BO60939 AC231760.1-201ENST00000498002 260 ntBASIC4.03□□□□□ -1.76
SCN2BO60939 AC139783.2-201ENST00000504847 1145 ntBASIC4.03□□□□□ -1.76
SCN2BO60939 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.03□□□□□ -1.76
SCN2BO60939 AC093720.1-201ENST00000505681 714 ntBASIC4.03□□□□□ -1.76
SCN2BO60939 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.03□□□□□ -1.76
SCN2BO60939 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.03□□□□□ -1.76
SCN2BO60939 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.03□□□□□ -1.76
SCN2BO60939 MIR4458-201ENST00000578872 75 ntBASIC4.03□□□□□ -1.76
SCN2BO60939 AC008536.1-201ENST00000602872 669 ntBASIC4.03□□□□□ -1.76
SCN2BO60939 AC093765.1-201ENST00000603758 881 ntBASIC4.03□□□□□ -1.76
SCN2BO60939 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN2BO60939 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SCN2BO60939 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
SCN2BO60939 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.02□□□□□ -1.77
SCN2BO60939 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SCN2BO60939 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
SCN2BO60939 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SCN2BO60939 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
SCN2BO60939 AL607077.1-201ENST00000401718 499 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms