Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.64□□□□□ -1.67
MSH4O15457 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.64□□□□□ -1.67
MSH4O15457 RPL5P32-201ENST00000454085 879 ntBASIC4.64□□□□□ -1.67
MSH4O15457 RPS26P28-201ENST00000470806 348 ntBASIC4.64□□□□□ -1.67
MSH4O15457 AL161747.1-201ENST00000480068 358 ntBASIC4.64□□□□□ -1.67
MSH4O15457 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
MSH4O15457 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.64□□□□□ -1.67
MSH4O15457 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.64□□□□□ -1.67
MSH4O15457 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.64□□□□□ -1.67
MSH4O15457 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.64□□□□□ -1.67
MSH4O15457 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.64□□□□□ -1.67
MSH4O15457 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.64□□□□□ -1.67
MSH4O15457 MIR3160-1-201ENST00000577972 85 ntBASIC4.64□□□□□ -1.67
MSH4O15457 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.64□□□□□ -1.67
MSH4O15457 AC114878.2-201ENST00000604863 1251 ntBASIC4.64□□□□□ -1.67
MSH4O15457 AL031666.3-201ENST00000609320 1006 ntBASIC4.64□□□□□ -1.67
MSH4O15457 AC004241.3-201ENST00000611728 517 ntBASIC4.64□□□□□ -1.67
MSH4O15457 SNX18P1Y-201ENST00000616231 511 ntBASIC4.64□□□□□ -1.67
MSH4O15457 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.64□□□□□ -1.67
MSH4O15457 SCN1A-220ENST00000641603 12506 ntBASIC4.64□□□□□ -1.67
MSH4O15457 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
MSH4O15457 USP9YP4-201ENST00000424401 1745 ntBASIC4.63□□□□□ -1.67
MSH4O15457 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
MSH4O15457 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.63□□□□□ -1.67
MSH4O15457 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
MSH4O15457 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
MSH4O15457 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.63□□□□□ -1.67
MSH4O15457 AC027228.2-201ENST00000567141 2154 ntBASIC4.63□□□□□ -1.67
MSH4O15457 SPRR2C-201ENST00000290702 219 ntBASIC4.63□□□□□ -1.67
MSH4O15457 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MSH4O15457 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.63□□□□□ -1.67
MSH4O15457 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.63□□□□□ -1.67
MSH4O15457 YY1P1-201ENST00000427625 668 ntBASIC4.63□□□□□ -1.67
MSH4O15457 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.63□□□□□ -1.67
MSH4O15457 Z85994.2-201ENST00000434327 452 ntBASIC4.63□□□□□ -1.67
MSH4O15457 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.63□□□□□ -1.67
MSH4O15457 AC092447.2-201ENST00000435487 669 ntBASIC4.63□□□□□ -1.67
MSH4O15457 HLA-N-201ENST00000437516 135 ntBASIC4.63□□□□□ -1.67
MSH4O15457 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.63□□□□□ -1.67
MSH4O15457 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.63□□□□□ -1.67
MSH4O15457 RAD23BP3-201ENST00000454157 1152 ntBASIC4.63□□□□□ -1.67
MSH4O15457 RPL36AP13-201ENST00000457490 317 ntBASIC4.63□□□□□ -1.67
MSH4O15457 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.63□□□□□ -1.67
MSH4O15457 AP000942.1-201ENST00000463969 747 ntBASIC4.63□□□□□ -1.67
MSH4O15457 AL672167.3-201ENST00000465951 960 ntBASIC4.63□□□□□ -1.67
MSH4O15457 RPL7P1-201ENST00000468161 747 ntBASIC4.63□□□□□ -1.67
MSH4O15457 RPL7P9-201ENST00000468715 747 ntBASIC4.63□□□□□ -1.67
MSH4O15457 OR52A4P-203ENST00000498233 1014 ntBASIC4.63□□□□□ -1.67
MSH4O15457 PPBPP1-201ENST00000510807 373 ntBASIC4.63□□□□□ -1.67
MSH4O15457 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.63□□□□□ -1.67
MSH4O15457 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
MSH4O15457 RNU6-551P-201ENST00000516661 103 ntBASIC4.63□□□□□ -1.67
MSH4O15457 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.63□□□□□ -1.67
MSH4O15457 SEC11B-201ENST00000518383 499 ntBASIC4.63□□□□□ -1.67
MSH4O15457 MTND1P6-201ENST00000523621 946 ntBASIC4.63□□□□□ -1.67
MSH4O15457 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.63□□□□□ -1.67
MSH4O15457 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.63□□□□□ -1.67
MSH4O15457 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.63□□□□□ -1.67
MSH4O15457 AL121834.1-201ENST00000572284 509 ntBASIC4.63□□□□□ -1.67
MSH4O15457 RPL23AP87-202ENST00000573039 466 ntBASIC4.63□□□□□ -1.67
MSH4O15457 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.63□□□□□ -1.67
MSH4O15457 MIR5684-201ENST00000585074 65 ntBASIC4.63□□□□□ -1.67
MSH4O15457 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.63□□□□□ -1.67
MSH4O15457 RNU4-89P-201ENST00000607443 133 ntBASIC4.63□□□□□ -1.67
MSH4O15457 AL135786.2-201ENST00000608422 615 ntBASIC4.63□□□□□ -1.67
MSH4O15457 MIR7702-201ENST00000621931 59 ntBASIC4.63□□□□□ -1.67
MSH4O15457 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.63□□□□□ -1.67
MSH4O15457 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
MSH4O15457 BTBD10P1-201ENST00000549824 1352 ntBASIC4.63□□□□□ -1.67
MSH4O15457 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
MSH4O15457 MFSD8-220ENST00000641243 1422 ntBASIC4.63□□□□□ -1.67
MSH4O15457 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.62□□□□□ -1.67
MSH4O15457 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.62□□□□□ -1.67
MSH4O15457 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
MSH4O15457 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
MSH4O15457 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
MSH4O15457 RN7SKP227-201ENST00000364445 330 ntBASIC4.62□□□□□ -1.67
MSH4O15457 SNORA37-201ENST00000384504 129 ntBASIC4.62□□□□□ -1.67
MSH4O15457 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.62□□□□□ -1.67
MSH4O15457 HSPE1P12-201ENST00000412576 301 ntBASIC4.62□□□□□ -1.67
MSH4O15457 RFESDP1-201ENST00000422350 461 ntBASIC4.62□□□□□ -1.67
MSH4O15457 AJ239321.1-201ENST00000424255 564 ntBASIC4.62□□□□□ -1.67
MSH4O15457 AC115285.1-201ENST00000424879 736 ntBASIC4.62□□□□□ -1.67
MSH4O15457 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.62□□□□□ -1.67
MSH4O15457 RPS4XP4-201ENST00000443195 763 ntBASIC4.62□□□□□ -1.67
MSH4O15457 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.62□□□□□ -1.67
MSH4O15457 RAD1P2-201ENST00000446414 663 ntBASIC4.62□□□□□ -1.67
MSH4O15457 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.62□□□□□ -1.67
MSH4O15457 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.62□□□□□ -1.67
MSH4O15457 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.62□□□□□ -1.67
MSH4O15457 ATG10-AS1-201ENST00000504846 648 ntBASIC4.62□□□□□ -1.67
MSH4O15457 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
MSH4O15457 AC108064.1-201ENST00000513791 460 ntBASIC4.62□□□□□ -1.67
MSH4O15457 RNU7-143P-201ENST00000516781 65 ntBASIC4.62□□□□□ -1.67
MSH4O15457 TOMM20P2-201ENST00000540082 421 ntBASIC4.62□□□□□ -1.67
MSH4O15457 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.62□□□□□ -1.67
MSH4O15457 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.62□□□□□ -1.67
MSH4O15457 CYP4A43P-201ENST00000568156 121 ntBASIC4.62□□□□□ -1.67
MSH4O15457 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.62□□□□□ -1.67
MSH4O15457 MTND6P33-201ENST00000571794 183 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms