Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC28A1O00337 MIR4646-201ENST00000580775 63 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC28A1O00337 AC133552.5-201ENST00000604266 540 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 AL133338.2-201ENST00000604292 736 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 SNX18P1Y-201ENST00000616231 511 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 AC016769.4-201ENST00000616893 535 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC28A1O00337 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC28A1O00337 AL355480.1-201ENST00000629041 99 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 AC083865.1-201ENST00000636634 831 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC28A1O00337 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SLC28A1O00337 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SLC28A1O00337 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SLC28A1O00337 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SLC28A1O00337 DDX18P3-201ENST00000404856 2007 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SLC28A1O00337 MAPK10-304ENST00000641341 3984 ntBASIC4.34□□□□□ -1.72
SLC28A1O00337 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC28A1O00337 AC105074.1-201ENST00000623380 3095 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC28A1O00337 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
SLC28A1O00337 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC28A1O00337 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC28A1O00337 AC021146.4-201ENST00000309229 279 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 AL590240.1-201ENST00000334118 313 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC28A1O00337 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SLC28A1O00337 SPTLC1P2-201ENST00000407089 121 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 RN7SKP167-201ENST00000411047 285 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC28A1O00337 OR2X1P-201ENST00000421144 687 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 BX510359.3-201ENST00000422168 306 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC28A1O00337 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.33□□□□□ -1.72
SLC28A1O00337 RPS12P10-201ENST00000427031 377 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 AC073335.1-201ENST00000427776 363 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 EIF2S2P3-201ENST00000428356 999 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 SKP1P3-201ENST00000429280 487 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC28A1O00337 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC28A1O00337 EEF1A1P1-201ENST00000447052 739 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 CYCSP42-201ENST00000450823 238 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 AC091685.2-201ENST00000454924 864 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 RN7SL205P-201ENST00000490174 284 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC28A1O00337 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.33□□□□□ -1.72
SLC28A1O00337 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC28A1O00337 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.33□□□□□ -1.72
SLC28A1O00337 RNA5SP497-201ENST00000516081 97 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 IGKV2-36-201ENST00000519999 223 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 VTA1P2-201ENST00000520205 911 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.33□□□□□ -1.72
SLC28A1O00337 PCNPP1-201ENST00000552501 511 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC28A1O00337 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC28A1O00337 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC28A1O00337 MTND6P33-201ENST00000571794 183 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 MIR4716-201ENST00000579628 84 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 AP005119.2-201ENST00000579735 1105 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 MIR4737-201ENST00000583979 81 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SLC28A1O00337 AC073091.2-201ENST00000603205 907 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 AP000894.4-201ENST00000610185 483 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC28A1O00337 SDR42E1P1-201ENST00000611327 477 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 MIR7154-201ENST00000620673 73 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SLC28A1O00337 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.33□□□□□ -1.72
SLC28A1O00337 LINC01808-202ENST00000641680 1116 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC28A1O00337 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC28A1O00337 AC087190.4-201ENST00000574616 8334 ntBASIC4.33□□□□□ -1.72
SLC28A1O00337 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC28A1O00337 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SLC28A1O00337 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC28A1O00337 AL353743.4-201ENST00000422653 1547 ntBASIC4.32□□□□□ -1.72
SLC28A1O00337 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SLC28A1O00337 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.32□□□□□ -1.72
SLC28A1O00337 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SLC28A1O00337 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SLC28A1O00337 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SLC28A1O00337 AC067945.1-201ENST00000342609 618 ntBASIC4.32□□□□□ -1.72
SLC28A1O00337 RNU6-792P-201ENST00000363490 107 ntBASIC4.32□□□□□ -1.72
SLC28A1O00337 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SLC28A1O00337 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SLC28A1O00337 RNU6-796P-201ENST00000391086 107 ntBASIC4.32□□□□□ -1.72
SLC28A1O00337 VN1R8P-201ENST00000407739 893 ntBASIC4.32□□□□□ -1.72
SLC28A1O00337 SNORA74C-2-201ENST00000411179 201 ntBASIC4.32□□□□□ -1.72
SLC28A1O00337 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.32□□□□□ -1.72
SLC28A1O00337 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC28A1O00337 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC28A1O00337 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC28A1O00337 DYNLL1P7-201ENST00000429273 258 ntBASIC4.32□□□□□ -1.72
SLC28A1O00337 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC28A1O00337 RPL23AP93-201ENST00000440847 484 ntBASIC4.32□□□□□ -1.72
SLC28A1O00337 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC28A1O00337 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms