Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC01109-201ENST00000603837 3081 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 RNU4-7P-201ENST00000364758 141 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 AL583835.1-201ENST00000399570 407 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 MIR921-201ENST00000401133 56 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 RPS24P12-201ENST00000402084 394 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 RANP4-201ENST00000413361 655 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 EIF4A1P1-201ENST00000420241 934 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 RPL17P36-201ENST00000420302 549 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 MTND4P24-201ENST00000424002 397 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 MTCYBP29-201ENST00000436327 1006 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 AC114755.5-201ENST00000447760 831 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 AL353718.1-201ENST00000451028 517 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 VN1R32P-201ENST00000452234 905 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 RPL35AP15-201ENST00000468042 339 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 RPL23AP37-201ENST00000479658 549 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 RPL35P6-201ENST00000490024 372 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 RNA5SP446-201ENST00000515955 82 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 AF186190.1-201ENST00000517470 480 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 CKS1BP1-201ENST00000555221 240 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 AC007224.1-201ENST00000564410 144 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 MIR3160-1-201ENST00000577972 85 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 AL160290.3-201ENST00000604869 165 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 AC097505.1-201ENST00000610199 565 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 ZYXP1-201ENST00000617638 118 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 AL023881.1-201ENST00000621088 301 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 RPL23AP61-201ENST00000623642 466 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 AC091046.3-201ENST00000631455 1574 ntBASIC4.48□□□□□ -1.69
NEDD8-MDP1E9PL57 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 MAPK10-303ENST00000641324 3959 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 RNA5SP28-201ENST00000363841 119 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC097374.1-203ENST00000400783 485 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 RPL5P19-201ENST00000404228 893 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 RN7SKP263-201ENST00000411194 309 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 MFSD13B-201ENST00000420133 1290 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC062016.2-201ENST00000420950 676 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 ZNF965P-201ENST00000432501 817 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 DDX39BP2-208ENST00000453923 258 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 MTCO1P31-201ENST00000506355 492 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC008958.1-201ENST00000511047 682 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC109635.6-201ENST00000525487 1113 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC025884.1-201ENST00000556034 378 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC021483.2-201ENST00000567415 758 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC092474.3-201ENST00000603022 568 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 MTCO3P22-201ENST00000603219 784 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC067959.1-201ENST00000604334 379 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AL354984.3-201ENST00000604803 325 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC025016.1-201ENST00000616746 682 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC009501.3-201ENST00000605001 1352 ntBASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.47□□□□□ -1.69
NEDD8-MDP1E9PL57 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
NEDD8-MDP1E9PL57 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
NEDD8-MDP1E9PL57 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
NEDD8-MDP1E9PL57 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms