Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 AADACP1-206ENST00000561502 1193 ntBASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 AC090751.1-201ENST00000566966 267 ntBASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 MIR3912-201ENST00000577566 105 ntBASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 AC013444.2-201ENST00000603317 787 ntBASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 AC095055.1-201ENST00000603472 1113 ntBASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 AL445222.1-201ENST00000607259 628 ntBASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 AP000255.1-201ENST00000610276 676 ntBASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 RPSAP73-201ENST00000614820 330 ntBASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 DDX18P3-201ENST00000404856 2007 ntBASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 AC006042.3-201ENST00000454684 1469 ntBASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 AC092079.1-201ENST00000558620 1985 ntBASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 AC104454.1-201ENST00000421341 1401 ntBASIC4.8□□□□□ -1.64
DTX4Q9Y2E6 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AL009174.1-201ENST00000426577 416 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC005033.1-201ENST00000428904 813 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 RPL21P110-201ENST00000433345 446 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 GAPDHP58-201ENST00000438477 1006 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC092809.1-201ENST00000441469 474 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 HMGB1P48-201ENST00000446155 598 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 OR52E3P-201ENST00000452083 936 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 CBX1P2-201ENST00000453841 458 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 RNA5SP103-201ENST00000459503 118 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 PRDX3P4-201ENST00000470828 747 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 RPL32P9-201ENST00000487963 407 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC044860.2-201ENST00000561005 179 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AL354943.1-201ENST00000572103 781 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC008088.1-201ENST00000580993 280 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC090312.2-201ENST00000582687 378 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 MRPS35P3-201ENST00000603189 709 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC211433.2-201ENST00000608433 387 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AP005137.2-201ENST00000609238 400 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC016717.3-201ENST00000624730 554 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC135068.12-201ENST00000637370 931 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 MIR1322-201ENST00000638013 71 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 BX005019.1-201ENST00000561881 1810 ntBASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DTX4Q9Y2E6 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.78□□□□□ -1.64
DTX4Q9Y2E6 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
DTX4Q9Y2E6 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
DTX4Q9Y2E6 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.78□□□□□ -1.64
DTX4Q9Y2E6 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
DTX4Q9Y2E6 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
DTX4Q9Y2E6 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
DTX4Q9Y2E6 FAM133CP-201ENST00000332869 704 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms