Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC022968.1-201ENST00000567372 442 ntBASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 AC007599.1-201ENST00000568688 1174 ntBASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 AC023509.5-201ENST00000617434 807 ntBASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 FP236240.3-201ENST00000623061 327 ntBASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 AF001550.2-201ENST00000636643 217 ntBASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 AC067945.1-201ENST00000342609 618 ntBASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 MIR195-201ENST00000385194 87 ntBASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 SEPT7P8-201ENST00000413308 775 ntBASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 AL121878.1-201ENST00000418638 859 ntBASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 AC104849.1-201ENST00000462623 405 ntBASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 SCARNA14-201ENST00000516903 136 ntBASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 IGKV2D-19-201ENST00000523346 262 ntBASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 OR51C1P-201ENST00000608504 942 ntBASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 AL034408.1-202ENST00000636088 415 ntBASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
SHANK2Q9UPX8 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHANK2Q9UPX8 U1.1-201ENST00000384101 164 ntBASIC6.03□□□□□ -1.44
SHANK2Q9UPX8 HMGN2P31-201ENST00000432430 273 ntBASIC6.03□□□□□ -1.44
SHANK2Q9UPX8 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHANK2Q9UPX8 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.03□□□□□ -1.44
SHANK2Q9UPX8 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC6.03□□□□□ -1.44
SHANK2Q9UPX8 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.03□□□□□ -1.44
SHANK2Q9UPX8 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC6.03□□□□□ -1.44
SHANK2Q9UPX8 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHANK2Q9UPX8 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.03□□□□□ -1.44
SHANK2Q9UPX8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHANK2Q9UPX8 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHANK2Q9UPX8 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHANK2Q9UPX8 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHANK2Q9UPX8 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SHANK2Q9UPX8 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 AC007066.1-201ENST00000392902 381 ntBASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 AC117434.1-201ENST00000419971 836 ntBASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 AC073335.1-201ENST00000427776 363 ntBASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 NPM1P34-201ENST00000428821 893 ntBASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 AC092691.2-201ENST00000461787 803 ntBASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 RN7SKP141-201ENST00000516167 338 ntBASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 RNU1-95P-201ENST00000516357 160 ntBASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 RNU1-103P-201ENST00000516502 125 ntBASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 RNU1-128P-201ENST00000516704 160 ntBASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 AL031666.3-201ENST00000609320 1006 ntBASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC6.02□□□□□ -1.44
SHANK2Q9UPX8 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 AC093591.2-201ENST00000565254 3843 ntBASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 AC010300.1-201ENST00000600671 5134 ntBASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 MTND5P1-201ENST00000445440 1375 ntBASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 AC008079.2-201ENST00000623543 20396 ntBASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 PGBD4P8-201ENST00000412993 562 ntBASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 AL451050.1-201ENST00000450126 415 ntBASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 OR9M1P-201ENST00000459641 921 ntBASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 AC073530.2-201ENST00000623987 261 ntBASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHANK2Q9UPX8 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 AC023632.6-201ENST00000624338 2177 ntBASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 AL049781.1-201ENST00000623195 3585 ntBASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SHANK2Q9UPX8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms