Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC093671.1-201ENST00000624981 2929 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 RNA5SP131-201ENST00000365452 119 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 Y_RNA.359-201ENST00000365498 102 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 Y_RNA.408-201ENST00000383987 102 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 SNORA51.12-201ENST00000384448 134 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 RNY3P10-201ENST00000384764 102 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC087752.1-201ENST00000391360 558 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 CYCSP45-201ENST00000402289 315 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AL590290.1-201ENST00000405336 380 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 RPS7P13-201ENST00000413955 498 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 BMS1P17-202ENST00000416720 316 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 RPL7P4-203ENST00000430239 730 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 CYCSP11-201ENST00000436426 315 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 SUMO2P3-201ENST00000438311 288 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC005297.1-201ENST00000444765 862 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 COX6CP18-201ENST00000448769 222 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC104306.1-201ENST00000449702 371 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 RPL31P15-201ENST00000449770 338 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 ZNF114P1-201ENST00000453500 292 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 SSXP1-201ENST00000453640 473 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 RPL9P33-201ENST00000484311 566 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 PPIAP19-201ENST00000486414 492 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 SETP14-201ENST00000497538 873 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC093281.2-201ENST00000510153 597 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC009962.1-201ENST00000567327 3813 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC008521.2-201ENST00000591021 259 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC083899.3-201ENST00000603413 594 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC005332.6-201ENST00000613178 446 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC234782.5-201ENST00000617723 324 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC127024.6-201ENST00000621598 424 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC021106.3-201ENST00000623925 531 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 AC025048.6-202ENST00000627667 438 ntBASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.86□□□□□ -1.47
PPARGC1AQ9UBK2 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 AC092447.7-201ENST00000422212 1621 ntBASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 RNA5SP46-201ENST00000362370 120 ntBASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 RNU6-1066P-201ENST00000363573 105 ntBASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 SNORA75-201ENST00000384158 137 ntBASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 RNU6-1042P-201ENST00000384204 107 ntBASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 RNU2-42P-201ENST00000410697 113 ntBASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 AL450992.3-201ENST00000413192 568 ntBASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 RPL21P108-201ENST00000413857 481 ntBASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 AC104843.2-201ENST00000427666 297 ntBASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 AC064862.4-201ENST00000442180 334 ntBASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 HMGN1P36-201ENST00000446623 298 ntBASIC5.85□□□□□ -1.47
PPARGC1AQ9UBK2 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms