Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHD7Q9P2D1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHD7Q9P2D1 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHD7Q9P2D1 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHD7Q9P2D1 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHD7Q9P2D1 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CHD7Q9P2D1 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.05□□□□□ -1.76
CHD7Q9P2D1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CHD7Q9P2D1 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHD7Q9P2D1 PEX12P1-201ENST00000400284 1048 ntBASIC4.05□□□□□ -1.76
CHD7Q9P2D1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.05□□□□□ -1.76
CHD7Q9P2D1 RBMY2UP-201ENST00000453474 324 ntBASIC4.05□□□□□ -1.76
CHD7Q9P2D1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.05□□□□□ -1.76
CHD7Q9P2D1 RPS3AP14-201ENST00000483907 780 ntBASIC4.05□□□□□ -1.76
CHD7Q9P2D1 RPL21P13-201ENST00000488305 481 ntBASIC4.05□□□□□ -1.76
CHD7Q9P2D1 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CHD7Q9P2D1 AC097462.2-201ENST00000504623 481 ntBASIC4.05□□□□□ -1.76
CHD7Q9P2D1 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.05□□□□□ -1.76
CHD7Q9P2D1 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CHD7Q9P2D1 AC005344.1-201ENST00000613391 459 ntBASIC4.05□□□□□ -1.76
CHD7Q9P2D1 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CHD7Q9P2D1 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHD7Q9P2D1 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.04□□□□□ -1.76
CHD7Q9P2D1 AC097461.1-201ENST00000568928 2821 ntBASIC4.04□□□□□ -1.76
CHD7Q9P2D1 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CHD7Q9P2D1 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.04□□□□□ -1.76
CHD7Q9P2D1 AP002001.2-201ENST00000529025 1469 ntBASIC4.04□□□□□ -1.76
CHD7Q9P2D1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CHD7Q9P2D1 RNA5SP267-201ENST00000364893 126 ntBASIC4.04□□□□□ -1.76
CHD7Q9P2D1 EIF4A1P1-201ENST00000420241 934 ntBASIC4.04□□□□□ -1.76
CHD7Q9P2D1 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.04□□□□□ -1.76
CHD7Q9P2D1 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.04□□□□□ -1.76
CHD7Q9P2D1 AC012417.1-201ENST00000582307 1039 ntBASIC4.04□□□□□ -1.76
CHD7Q9P2D1 AC119674.1-212ENST00000641155 993 ntBASIC4.04□□□□□ -1.76
CHD7Q9P2D1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.04□□□□□ -1.76
CHD7Q9P2D1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.04□□□□□ -1.76
CHD7Q9P2D1 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CHD7Q9P2D1 RNU11-201ENST00000387069 134 ntBASIC4.04□□□□□ -1.76
CHD7Q9P2D1 RPL7P44-201ENST00000424827 742 ntBASIC4.04□□□□□ -1.76
CHD7Q9P2D1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.04□□□□□ -1.76
CHD7Q9P2D1 RPL23AP65-201ENST00000475608 468 ntBASIC4.04□□□□□ -1.76
CHD7Q9P2D1 RPL7P23-201ENST00000493874 747 ntBASIC4.04□□□□□ -1.76
CHD7Q9P2D1 AC090151.1-201ENST00000520784 730 ntBASIC4.04□□□□□ -1.76
CHD7Q9P2D1 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.04□□□□□ -1.76
CHD7Q9P2D1 AL360012.1-201ENST00000602813 131 ntBASIC4.04□□□□□ -1.76
CHD7Q9P2D1 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CHD7Q9P2D1 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.03□□□□□ -1.76
CHD7Q9P2D1 RNA5SP374-201ENST00000362939 125 ntBASIC4.03□□□□□ -1.76
CHD7Q9P2D1 MTND4LP20-201ENST00000402379 270 ntBASIC4.03□□□□□ -1.76
CHD7Q9P2D1 AC097713.2-201ENST00000430199 356 ntBASIC4.03□□□□□ -1.76
CHD7Q9P2D1 AC092641.1-201ENST00000440229 772 ntBASIC4.03□□□□□ -1.76
CHD7Q9P2D1 RPS27AP15-201ENST00000447672 466 ntBASIC4.03□□□□□ -1.76
CHD7Q9P2D1 CYCSP35-201ENST00000451978 304 ntBASIC4.03□□□□□ -1.76
CHD7Q9P2D1 HMGB3P16-201ENST00000508037 287 ntBASIC4.03□□□□□ -1.76
CHD7Q9P2D1 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CHD7Q9P2D1 AC008966.2-201ENST00000606157 453 ntBASIC4.03□□□□□ -1.76
CHD7Q9P2D1 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHD7Q9P2D1 AC009229.4-201ENST00000623854 1947 ntBASIC4.03□□□□□ -1.76
CHD7Q9P2D1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.03□□□□□ -1.76
CHD7Q9P2D1 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHD7Q9P2D1 ZNF962P-201ENST00000443465 3140 ntBASIC4.03□□□□□ -1.76
CHD7Q9P2D1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.03□□□□□ -1.76
CHD7Q9P2D1 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.03□□□□□ -1.76
CHD7Q9P2D1 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.03□□□□□ -1.76
CHD7Q9P2D1 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHD7Q9P2D1 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHD7Q9P2D1 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CHD7Q9P2D1 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 AL591419.1-201ENST00000427423 339 ntBASIC4.02□□□□□ -1.77
CHD7Q9P2D1 EIF4A1P11-201ENST00000451239 222 ntBASIC4.02□□□□□ -1.77
CHD7Q9P2D1 SNORD105B-201ENST00000458770 79 ntBASIC4.02□□□□□ -1.77
CHD7Q9P2D1 AC025518.1-201ENST00000479856 347 ntBASIC4.02□□□□□ -1.77
CHD7Q9P2D1 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 AC063950.1-201ENST00000552036 308 ntBASIC4.02□□□□□ -1.77
CHD7Q9P2D1 AP001642.1-201ENST00000624727 2117 ntBASIC4.02□□□□□ -1.77
CHD7Q9P2D1 AP000473.2-201ENST00000602659 1537 ntBASIC4.02□□□□□ -1.77
CHD7Q9P2D1 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.02□□□□□ -1.77
CHD7Q9P2D1 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 MARK2P15-201ENST00000432204 2186 ntBASIC4.02□□□□□ -1.77
CHD7Q9P2D1 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 RPL7P60-201ENST00000397636 735 ntBASIC4.02□□□□□ -1.77
CHD7Q9P2D1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 VDAC1P9-201ENST00000412766 841 ntBASIC4.02□□□□□ -1.77
CHD7Q9P2D1 AC017079.2-201ENST00000416102 485 ntBASIC4.02□□□□□ -1.77
CHD7Q9P2D1 AC004069.2-201ENST00000505438 1114 ntBASIC4.02□□□□□ -1.77
CHD7Q9P2D1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 AL451044.1-201ENST00000604867 238 ntBASIC4.02□□□□□ -1.77
CHD7Q9P2D1 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CHD7Q9P2D1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms