Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 IQCB2P-201ENST00000401788 1633 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 OR11H4-201ENST00000315409 1082 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 RN7SKP280-201ENST00000364196 304 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 ENSAP1-201ENST00000392855 326 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 RNU6-628P-201ENST00000410675 107 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 CEACAMP8-201ENST00000413902 580 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 AL161631.1-201ENST00000417933 486 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 UBTFL3-201ENST00000418934 1024 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 AC122718.1-201ENST00000439448 744 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 PTMAP3-201ENST00000447474 330 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 RPL5P32-201ENST00000454085 879 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 FAM133DP-201ENST00000464802 691 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 UBTFL6-201ENST00000477929 1024 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 RN7SL809P-201ENST00000482040 297 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 AC012158.1-204ENST00000483430 465 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 AGGF1P6-201ENST00000569213 976 ntBASIC4.53□□□□□ -1.68
NXF3Q9H4D5 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.53□□□□□ -1.68
NXF3Q9H4D5 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 NOL8P1-201ENST00000508336 3529 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 RNU6-1331P-201ENST00000363658 106 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 TPT1P2-201ENST00000413105 503 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 MTCYBP21-201ENST00000443300 1113 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 RPL21P89-201ENST00000444021 467 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 RPS6P2-201ENST00000454208 705 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 ARL4AP1-201ENST00000503220 705 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 AP001960.1-201ENST00000506494 658 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 DYNLL1P4-201ENST00000549314 266 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 AC008759.1-201ENST00000589783 983 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 AL008729.2-201ENST00000606393 473 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 SNORA35B-201ENST00000607417 129 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 AC131238.1-201ENST00000617135 328 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 AL161637.1-201ENST00000622380 412 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 AC093535.2-201ENST00000624769 2326 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.52□□□□□ -1.69
NXF3Q9H4D5 AC116667.1-201ENST00000604855 2072 ntBASIC4.52□□□□□ -1.69
NXF3Q9H4D5 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.51□□□□□ -1.69
NXF3Q9H4D5 AP001273.1-201ENST00000624493 3152 ntBASIC4.51□□□□□ -1.69
NXF3Q9H4D5 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
NXF3Q9H4D5 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NXF3Q9H4D5 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms