Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 BX510359.1-201ENST00000456973 237 ntBASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 RN7SL293P-201ENST00000481765 281 ntBASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 DEFB109F-201ENST00000491870 277 ntBASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 RPL5P23-201ENST00000496040 868 ntBASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 AC004069.2-201ENST00000505438 1114 ntBASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 HSPD1P15-201ENST00000505573 1122 ntBASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 AC116096.1-201ENST00000566804 2314 ntBASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 AL590609.2-201ENST00000421430 368 ntBASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 DEFB109A-201ENST00000482450 265 ntBASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 FTH1P9-201ENST00000513251 355 ntBASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 RN7SKP57-201ENST00000517248 293 ntBASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 AC010653.1-201ENST00000571108 881 ntBASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 AC244505.7-201ENST00000599675 272 ntBASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 AC011816.2-201ENST00000607089 556 ntBASIC5.23□□□□□ -1.57
SHANK3Q9BYB0 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 AC083899.2-201ENST00000423285 1376 ntBASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 Y_RNA.510-201ENST00000384511 114 ntBASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 RNU2-65P-201ENST00000410162 185 ntBASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 NPM1P34-201ENST00000428821 893 ntBASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 OR8I1P-201ENST00000529291 931 ntBASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 AC103968.1-201ENST00000557841 573 ntBASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 AC022106.2-201ENST00000620114 757 ntBASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 MTCO1P12-201ENST00000414273 1543 ntBASIC5.22□□□□□ -1.57
SHANK3Q9BYB0 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.21□□□□□ -1.57
SHANK3Q9BYB0 NAMPTP1-201ENST00000440465 2514 ntBASIC5.21□□□□□ -1.57
SHANK3Q9BYB0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SHANK3Q9BYB0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.57
SHANK3Q9BYB0 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 SKP1P3-201ENST00000429280 487 ntBASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 RPS17P13-201ENST00000448974 407 ntBASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 MTND6P6-201ENST00000478031 263 ntBASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 PHBP17-201ENST00000528576 541 ntBASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 ELOCP35-201ENST00000604289 336 ntBASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 AC019278.1-201ENST00000623516 479 ntBASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHANK3Q9BYB0 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 AL031121.1-201ENST00000406553 254 ntBASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 AL161631.1-201ENST00000417933 486 ntBASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 UBE2CP3-201ENST00000502715 450 ntBASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 HMGN1P15-201ENST00000513870 295 ntBASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 AC091167.4-201ENST00000605079 184 ntBASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 AC063952.1-203ENST00000634410 658 ntBASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHANK3Q9BYB0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms