Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC083899.3-201ENST00000603413 594 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 AL139286.1-201ENST00000604465 483 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 AC026979.4-201ENST00000606555 645 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 AC112503.2-201ENST00000609005 552 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 AC026368.1-201ENST00000614934 690 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 AC015804.1-201ENST00000622935 435 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 U6.107-201ENST00000637108 79 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSX3Q99909 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.17□□□□□ -1.74
SSX3Q99909 AC023421.1-201ENST00000590535 1785 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 AL136964.1-201ENST00000622038 2990 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSX3Q99909 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSX3Q99909 AL592494.2-201ENST00000425455 1548 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SSX3Q99909 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX3Q99909 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SSX3Q99909 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSX3Q99909 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SSX3Q99909 SNURFL-201ENST00000309296 343 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSX3Q99909 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.16□□□□□ -1.74
SSX3Q99909 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.16□□□□□ -1.74
SSX3Q99909 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.16□□□□□ -1.74
SSX3Q99909 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX3Q99909 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SSX3Q99909 AC004448.2-201ENST00000422360 586 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.16□□□□□ -1.74
SSX3Q99909 RBMY2QP-201ENST00000429799 1147 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 RPS6P12-201ENST00000432491 726 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.16□□□□□ -1.74
SSX3Q99909 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.16□□□□□ -1.74
SSX3Q99909 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX3Q99909 RPS7P5-201ENST00000441482 581 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.16□□□□□ -1.74
SSX3Q99909 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX3Q99909 AL035407.2-201ENST00000454090 378 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.16□□□□□ -1.74
SSX3Q99909 snoU13.20-201ENST00000459180 104 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 AC008379.1-201ENST00000463655 464 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 AC015908.1-201ENST00000478739 476 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.16□□□□□ -1.74
SSX3Q99909 NDUFB5P1-201ENST00000508134 564 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 AC008562.1-201ENST00000521763 330 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 OR5AZ1P-201ENST00000527448 943 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 AP000676.2-201ENST00000529711 301 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX3Q99909 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSX3Q99909 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX3Q99909 AL049830.4-201ENST00000555149 351 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 AC027104.1-201ENST00000563702 681 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 AC008814.1-201ENST00000603797 406 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 AL392112.1-201ENST00000605115 829 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 VN1R9P-201ENST00000614184 867 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 AC073569.3-201ENST00000619055 682 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 AL445528.2-201ENST00000620582 470 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 AC016717.3-201ENST00000624730 554 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSX3Q99909 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX3Q99909 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX3Q99909 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
SSX3Q99909 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSX3Q99909 AC107068.1-201ENST00000563286 4218 ntBASIC4.16□□□□□ -1.74
SSX3Q99909 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.15□□□□□ -1.74
SSX3Q99909 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
SSX3Q99909 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SSX3Q99909 RNA5SP455-201ENST00000365190 119 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX3Q99909 MIR589-201ENST00000385238 99 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 AL035419.1-201ENST00000397037 564 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 AP000580.1-201ENST00000404439 358 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 RNU2-65P-201ENST00000410162 185 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.15□□□□□ -1.75
SSX3Q99909 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX3Q99909 DDX39BP1-205ENST00000422507 192 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 AC073310.1-201ENST00000423226 1033 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX3Q99909 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX3Q99909 ELOCP6-201ENST00000429066 328 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 VN1R54P-201ENST00000435210 1049 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX3Q99909 MRPL48P1-201ENST00000445390 636 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSX3Q99909 IGHV5-78-201ENST00000450948 295 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 BX842559.2-201ENST00000451418 605 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 AL645939.1-201ENST00000453429 797 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 ELOCP12-201ENST00000458706 328 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 GYG1P1-201ENST00000460864 698 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.15□□□□□ -1.75
SSX3Q99909 HMGN2P25-201ENST00000486956 268 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 AC092902.1-201ENST00000486999 259 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.15□□□□□ -1.75
SSX3Q99909 AC020890.1-201ENST00000491837 504 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 RN7SL244P-201ENST00000493405 297 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.15□□□□□ -1.75
SSX3Q99909 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX3Q99909 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.15□□□□□ -1.75
SSX3Q99909 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms