Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RPL23AP39-201ENST00000415533 405 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 BOLA3P4-201ENST00000418151 400 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AL161742.1-201ENST00000418154 584 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 FAM183DP-201ENST00000421987 399 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 IPPKP1-201ENST00000422501 768 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC3.59□□□□□ -1.83
LITAFQ99732 TRIM60P18-201ENST00000441518 828 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC3.59□□□□□ -1.83
LITAFQ99732 NOP56P2-201ENST00000447491 769 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC3.59□□□□□ -1.83
LITAFQ99732 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.59□□□□□ -1.83
LITAFQ99732 PPIAP32-201ENST00000449940 472 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 RPL36AP33-201ENST00000450395 310 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AC009244.1-201ENST00000450566 258 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LITAFQ99732 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
LITAFQ99732 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC3.59□□□□□ -1.83
LITAFQ99732 RN7SL591P-201ENST00000496150 292 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 CBX3P3-201ENST00000508108 532 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.59□□□□□ -1.83
LITAFQ99732 AC079140.3-201ENST00000511111 550 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AC010285.3-201ENST00000511668 676 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 MTND1P5-201ENST00000517906 940 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC3.59□□□□□ -1.83
LITAFQ99732 AC105031.1-201ENST00000518550 476 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 IGHVII-49-1-201ENST00000521760 224 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.59□□□□□ -1.83
LITAFQ99732 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 AP001207.1-201ENST00000524051 481 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.59□□□□□ -1.83
LITAFQ99732 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 AP002963.1-201ENST00000530590 184 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LITAFQ99732 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.59□□□□□ -1.83
LITAFQ99732 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 TRAV15-201ENST00000556680 249 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC3.59□□□□□ -1.83
LITAFQ99732 AC012414.6-201ENST00000568241 401 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AC074051.3-201ENST00000570238 358 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 MED31-202ENST00000574128 619 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 RN7SL32P-201ENST00000580514 281 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 MIR4732-201ENST00000581873 76 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC3.59□□□□□ -1.83
LITAFQ99732 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 GMFG-212ENST00000602185 423 ntTSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 MTCYBP22-201ENST00000603788 447 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AC107304.1-201ENST00000604229 296 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC3.59□□□□□ -1.83
LITAFQ99732 AC106028.5-201ENST00000610332 395 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AC005332.10-201ENST00000612725 619 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.59□□□□□ -1.83
LITAFQ99732 MIR7844-201ENST00000616161 122 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AC234782.5-201ENST00000617723 324 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AC099842.1-201ENST00000619919 596 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AL121985.3-201ENST00000620690 523 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LITAFQ99732 AC007204.1-201ENST00000621794 555 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AP003400.3-201ENST00000624904 346 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 AC092192.1-201ENST00000633154 1018 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC3.59□□□□□ -1.83
LITAFQ99732 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
LITAFQ99732 AC096656.1-201ENST00000623826 1364 ntBASIC3.59□□□□□ -1.83
LITAFQ99732 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.59□□□□□ -1.84
LITAFQ99732 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.84
LITAFQ99732 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.84
LITAFQ99732 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LITAFQ99732 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LITAFQ99732 AF287957.1-201ENST00000607368 1595 ntBASIC3.59□□□□□ -1.84
LITAFQ99732 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
LITAFQ99732 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.59□□□□□ -1.84
LITAFQ99732 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LITAFQ99732 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LITAFQ99732 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LITAFQ99732 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LITAFQ99732 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
LITAFQ99732 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
LITAFQ99732 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LITAFQ99732 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LITAFQ99732 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
LITAFQ99732 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC3.58□□□□□ -1.84
LITAFQ99732 MAPK10-349ENST00000641767 3661 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms