Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 RNU6-171P-201ENST00000384354 107 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 RNU6-272P-201ENST00000411028 104 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTP4A1Q93096 AL512661.1-201ENST00000434586 1253 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 AL590762.3-201ENST00000436372 640 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 AC004938.1-201ENST00000438468 308 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 RPS26P2-201ENST00000440331 348 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 AC004865.1-201ENST00000442276 1003 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 MOB1AP2-201ENST00000446060 614 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 AC018635.1-201ENST00000468292 1030 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 AC146507.1-201ENST00000468335 354 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 AC108751.2-201ENST00000469993 231 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 CYCSP20-201ENST00000473154 315 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 RN7SL222P-201ENST00000476452 299 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 Y_RNA.719-201ENST00000517156 106 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 AP000916.1-201ENST00000533869 835 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTP4A1Q93096 AC011611.5-201ENST00000552477 578 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 NMNAT1P1-201ENST00000554095 876 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 ADAD1P2-201ENST00000588476 646 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 AP000894.4-201ENST00000610185 483 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 AL109659.3-201ENST00000624985 950 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 AL049536.1-201ENST00000625043 744 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 AP000542.2-201ENST00000623199 6179 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTP4A1Q93096 THAP12P4-201ENST00000528321 2266 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTP4A1Q93096 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTP4A1Q93096 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTP4A1Q93096 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTP4A1Q93096 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTP4A1Q93096 RARSP1-201ENST00000542842 1418 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTP4A1Q93096 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTP4A1Q93096 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTP4A1Q93096 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 RPL23P2-201ENST00000320371 421 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 RNU1-83P-201ENST00000363426 164 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 AL357515.1-201ENST00000402967 542 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 PTGES3P2-201ENST00000407942 482 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 RNA5SP239-201ENST00000410218 129 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 DDX39BP1-205ENST00000422507 192 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 PSMA2P3-201ENST00000429685 675 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 RPL34P20-201ENST00000442771 351 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 OR7E125P-201ENST00000443450 846 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 RPL23AP15-201ENST00000450202 459 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 AC009963.2-201ENST00000453431 138 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 FGF7P3-201ENST00000454645 303 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 AC133473.1-201ENST00000455173 299 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 AC005008.1-201ENST00000456151 612 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 AC008379.1-201ENST00000463655 464 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 AC010469.1-201ENST00000463864 576 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 AC074386.1-201ENST00000476560 767 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 HMGN2P25-201ENST00000486956 268 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 MTCO2P9-201ENST00000503214 694 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 RN7SKP66-201ENST00000516681 231 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTP4A1Q93096 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms