Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLHC1Q8NHS4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CLHC1Q8NHS4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLHC1Q8NHS4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLHC1Q8NHS4 AC016588.2-201ENST00000632484 3021 ntBASIC4.16□□□□□ -1.74
CLHC1Q8NHS4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLHC1Q8NHS4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLHC1Q8NHS4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CLHC1Q8NHS4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CLHC1Q8NHS4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLHC1Q8NHS4 SNORA70F-201ENST00000384142 135 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AL583835.1-201ENST00000399570 407 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AC007394.1-201ENST00000421941 531 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 OR51K1P-201ENST00000510214 950 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 FTH1P9-201ENST00000513251 355 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AC022790.1-201ENST00000522872 204 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 PHBP17-201ENST00000528576 541 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AC011477.5-201ENST00000586571 259 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AC008638.3-201ENST00000603341 463 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AL354984.3-201ENST00000604803 325 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AL031666.3-201ENST00000609320 1006 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AC007546.1-201ENST00000619452 559 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AC019278.1-201ENST00000623516 479 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AC092159.4-201ENST00000624944 550 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AC009950.2-201ENST00000636548 183 ntBASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.15□□□□□ -1.75
CLHC1Q8NHS4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 MARK2P15-201ENST00000432204 2186 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 RN7SKP103-201ENST00000363848 320 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 AC069213.2-201ENST00000420238 366 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 CYP4F29P-201ENST00000420685 446 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 RPL7P53-201ENST00000421245 739 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 RPL30P3-201ENST00000424262 333 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 RPEP3-201ENST00000425462 676 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 AC114495.1-201ENST00000441274 436 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 AC104306.1-201ENST00000449702 371 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 AC108145.1-201ENST00000503770 153 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 IGLVIV-65-201ENST00000517313 360 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 IFITM8P-201ENST00000522529 394 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 CYP4A43P-201ENST00000568156 121 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 AC008782.1-201ENST00000603386 430 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 AP003497.2-201ENST00000624220 967 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 RAD17P1-201ENST00000418130 2042 ntBASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.14□□□□□ -1.75
CLHC1Q8NHS4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 AC007685.1-201ENST00000329806 452 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 MIR513A2-201ENST00000385249 127 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 TMSB10P2-201ENST00000416049 131 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 RPS12P23-201ENST00000419579 400 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 AC006065.1-201ENST00000422539 802 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 BTG3P1-201ENST00000435859 716 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 RPL5P32-201ENST00000454085 879 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 DHFRP3-201ENST00000455595 559 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 AC053481.1-201ENST00000467217 306 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 RPS23P1-201ENST00000491662 432 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms