Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 AC138207.8-204ENST00000579588 527 ntBASIC5.36□□□□□ -1.55
DTX3Q8N9I9 RNU4ATAC-201ENST00000580972 127 ntBASIC5.36□□□□□ -1.55
DTX3Q8N9I9 MIR4271-201ENST00000582451 67 ntBASIC5.36□□□□□ -1.55
DTX3Q8N9I9 RN7SL475P-201ENST00000583379 298 ntBASIC5.36□□□□□ -1.55
DTX3Q8N9I9 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.36□□□□□ -1.55
DTX3Q8N9I9 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.36□□□□□ -1.55
DTX3Q8N9I9 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.36□□□□□ -1.55
DTX3Q8N9I9 AC114477.1-201ENST00000605097 605 ntBASIC5.36□□□□□ -1.55
DTX3Q8N9I9 AP003117.2-201ENST00000606010 545 ntBASIC5.36□□□□□ -1.55
DTX3Q8N9I9 AC009779.8-202ENST00000607990 932 ntBASIC5.36□□□□□ -1.55
DTX3Q8N9I9 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.36□□□□□ -1.55
DTX3Q8N9I9 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.36□□□□□ -1.55
DTX3Q8N9I9 AC008115.3-201ENST00000614874 549 ntBASIC5.36□□□□□ -1.55
DTX3Q8N9I9 AC108479.2-201ENST00000617314 601 ntBASIC5.36□□□□□ -1.55
DTX3Q8N9I9 MIR6085-201ENST00000618314 110 ntBASIC5.36□□□□□ -1.55
DTX3Q8N9I9 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
DTX3Q8N9I9 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
DTX3Q8N9I9 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
DTX3Q8N9I9 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
DTX3Q8N9I9 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
DTX3Q8N9I9 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
DTX3Q8N9I9 ASNSP1-204ENST00000641977 1664 ntBASIC5.36□□□□□ -1.55
DTX3Q8N9I9 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
DTX3Q8N9I9 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
DTX3Q8N9I9 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.36□□□□□ -1.55
DTX3Q8N9I9 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
DTX3Q8N9I9 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.36□□□□□ -1.55
DTX3Q8N9I9 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AC020656.2-201ENST00000613291 5309 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 PPIAP24-201ENST00000328558 471 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 RNU6-216P-201ENST00000363282 104 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 RNA5SP485-201ENST00000365053 119 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AC104297.1-201ENST00000393779 870 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AL391419.1-201ENST00000398901 1275 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 PSMA6P1-201ENST00000400275 741 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AC092634.6-201ENST00000418558 192 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AC006509.1-201ENST00000420788 634 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AL139413.1-201ENST00000421309 217 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 NIPA2P1-201ENST00000426223 976 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 HMGN2P27-201ENST00000427352 270 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 BTF3P10-201ENST00000433415 495 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 RPL37P21-201ENST00000435890 276 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AC092106.2-201ENST00000436597 487 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 RPL5P25-201ENST00000441148 775 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 OR7E125P-201ENST00000443450 846 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 GDI2P2-201ENST00000445131 608 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 RN7SL168P-201ENST00000463821 279 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AC074386.1-201ENST00000476560 767 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AL161747.1-201ENST00000480068 358 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 NDUFB4P2-201ENST00000509515 391 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 MTND5P4-201ENST00000514978 288 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 RNU6-430P-201ENST00000517078 107 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 HIGD1AP6-201ENST00000521833 279 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 DEFB131D-201ENST00000526803 184 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AC121758.1-202ENST00000556917 658 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 TPRX1P1-201ENST00000557620 319 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 CYCSP2-201ENST00000558168 301 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AC023968.1-201ENST00000560719 475 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AC005730.3-201ENST00000583067 366 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AC073046.2-201ENST00000604756 527 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AC092954.2-201ENST00000609103 430 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AC103710.1-201ENST00000610003 901 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 AL589743.6-201ENST00000611025 117 ntBASIC5.35□□□□□ -1.55
DTX3Q8N9I9 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms