Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 RPL23AP25-201ENST00000430973 463 ntBASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 RPL31P20-201ENST00000449593 360 ntBASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 AC105918.1-201ENST00000474399 838 ntBASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 AC012158.1-204ENST00000483430 465 ntBASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 RN7SKP122-201ENST00000515923 296 ntBASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 MYL12AP1-201ENST00000518490 515 ntBASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 TRAV8-5-201ENST00000537369 341 ntBASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 MIR3939-201ENST00000582614 106 ntBASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 AC069366.1-201ENST00000583159 838 ntBASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 HMGB2P1-201ENST00000591146 634 ntBASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 AL590392.1-201ENST00000604960 446 ntBASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 uc_338.13-201ENST00000618243 179 ntBASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
RFWD3Q6PCD5 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.69
RFWD3Q6PCD5 EIF2AP4-201ENST00000424793 1781 ntBASIC4.53□□□□□ -1.69
RFWD3Q6PCD5 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.69
RFWD3Q6PCD5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.53□□□□□ -1.69
RFWD3Q6PCD5 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 AC067945.1-201ENST00000342609 618 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 RPL5P19-201ENST00000404228 893 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 EIF4A1P3-201ENST00000411521 244 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 CDY14P-201ENST00000431260 1014 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 RPEP2-201ENST00000432149 701 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 MRPS33P4-201ENST00000434892 317 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 CDY12P-201ENST00000440679 1015 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 CDY13P-201ENST00000445813 1015 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 CDY23P-201ENST00000451661 1014 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 DDX39BP2-208ENST00000453923 258 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 RPL35AP15-201ENST00000468042 339 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 AC010618.1-201ENST00000469924 477 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 RPL23AP65-201ENST00000475608 468 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 AC108022.1-201ENST00000493466 478 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 AC108043.1-201ENST00000512696 574 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 AC090151.1-201ENST00000520784 730 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 OR5BC1P-201ENST00000529327 739 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 PSMB7P1-201ENST00000556349 514 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 AC090515.3-201ENST00000560431 315 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 AL354984.3-201ENST00000604803 325 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 Z98200.1-201ENST00000607298 470 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 AC020923.1-201ENST00000624021 917 ntBASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
RFWD3Q6PCD5 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 MFSD8-242ENST00000641690 4199 ntBASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 OR6C69P-201ENST00000394268 893 ntBASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 AC097374.1-203ENST00000400783 485 ntBASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 SNORA11F-201ENST00000408237 128 ntBASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 RNA5SP39-201ENST00000411245 120 ntBASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 AC062016.2-201ENST00000420950 676 ntBASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.51□□□□□ -1.69
RFWD3Q6PCD5 ZFAND6P1-201ENST00000434138 605 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms