Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AL022067.1-201ENST00000602426 454 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AL606834.3-201ENST00000602615 496 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AC020910.2-201ENST00000603635 610 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AC011626.1-201ENST00000604710 562 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AC090772.4-201ENST00000623599 362 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AC063976.2-201ENST00000425667 3556 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 RNA5SP388-201ENST00000362584 119 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 U3.2-201ENST00000362981 210 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 RNA5SP87-201ENST00000384155 118 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 RNU6-98P-201ENST00000384173 107 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 HSPD1P16-201ENST00000402302 394 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 MIR1193-201ENST00000408109 78 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 RN7SKP97-201ENST00000410966 333 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AC092638.1-201ENST00000411966 1275 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 EIF4A1P1-201ENST00000420241 934 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AC068287.1-201ENST00000430283 295 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AC009238.2-201ENST00000431026 355 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AC019185.1-201ENST00000442718 389 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 Z95152.1-201ENST00000453556 656 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 TPT1P1-201ENST00000458495 518 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 OR52A4P-201ENST00000472867 958 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 RPL21P129-201ENST00000491732 478 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AC026979.1-201ENST00000492525 396 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 UBE2V1P12-201ENST00000503954 474 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 NDUFB4P12-201ENST00000513465 390 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 SCARNA16.4-201ENST00000516956 187 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 RN7SKP99-201ENST00000517028 307 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 RN7SKP147-201ENST00000517154 244 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 POLR2KP1-201ENST00000553226 168 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 EDDM3DP-201ENST00000554692 434 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 ZNF971P-201ENST00000562068 1249 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 MIR4509-3-201ENST00000578671 94 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 MIR4509-2-201ENST00000583920 94 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 MTCO2P2-201ENST00000591258 225 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AC243654.2-201ENST00000612843 443 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 MIR4509-1-201ENST00000618224 94 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AP001273.1-201ENST00000624493 3152 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 THAP12P5-201ENST00000405864 2275 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AC025574.1-201ENST00000554784 1653 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 RNF6P1-201ENST00000444889 1784 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AC100778.3-201ENST00000580060 1750 ntBASIC4.25□□□□□ -1.73
PDLIM3Q53GG5 AC093311.1-201ENST00000506586 2021 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AC107068.1-201ENST00000563286 4218 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 ZNF849P-201ENST00000594711 1566 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 MFSD8-220ENST00000641243 1422 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms