Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 AL360081.1-201ENST00000428299 555 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 AP001324.1-201ENST00000428553 399 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 RPL12P28-201ENST00000430852 489 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 AF228730.2-201ENST00000438784 848 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 UBE2V1P3-201ENST00000439651 417 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 YWHAZP2-201ENST00000440317 728 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 ARL2BPP10-201ENST00000446487 531 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 ABCF2P2-201ENST00000450549 296 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 RN7SL354P-201ENST00000469282 294 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 RPL32P9-201ENST00000487963 407 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 NDUFA5P12-201ENST00000503796 343 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 AC017037.1-201ENST00000508460 471 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 OR4C2P-201ENST00000530855 1064 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 MTND2P17-201ENST00000550281 688 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 AC022960.2-201ENST00000616300 666 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 AC091953.3-201ENST00000623220 236 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 AC019278.1-201ENST00000623516 479 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 AL049536.1-201ENST00000625043 744 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AC066616.2-201ENST00000559334 1481 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 OTUD4P1-201ENST00000237841 3067 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 MIR550A3-201ENST00000390735 95 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 MIR1911-201ENST00000410783 80 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AL159169.1-201ENST00000421119 127 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 UQCRBP1-201ENST00000421129 336 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AC115285.1-201ENST00000424879 736 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AL590762.4-201ENST00000425885 253 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AL365396.1-201ENST00000430854 671 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AL132765.1-201ENST00000434165 553 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 CEACAMP6-201ENST00000452007 574 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 ANP32BP2-201ENST00000454525 545 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AC079804.1-201ENST00000461922 436 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AC010326.1-201ENST00000462726 602 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 RN7SL812P-201ENST00000493791 279 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 KCTD9P2-201ENST00000512203 1013 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 IGKV1-32-201ENST00000519290 311 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 OR5AN2P-201ENST00000534535 896 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 OR8X1P-201ENST00000534542 869 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 MTND2P13-201ENST00000577438 1039 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 VN1R84P-201ENST00000593697 235 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AC012603.1-201ENST00000606424 528 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AL021707.7-201ENST00000607991 416 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 RN7SL722P-201ENST00000617780 284 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 RN7SL565P-201ENST00000618246 284 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 OR10AB1P-202ENST00000641219 1686 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 AC090229.1-201ENST00000590983 1609 ntBASIC3.29□□□□□ -1.88
HIST1H1AQ02539 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HIST1H1AQ02539 MAPK10-373ENST00000641983 6772 ntBASIC3.28□□□□□ -1.88
HIST1H1AQ02539 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HIST1H1AQ02539 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HIST1H1AQ02539 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HIST1H1AQ02539 FAM3C2-201ENST00000312214 681 ntBASIC3.28□□□□□ -1.88
HIST1H1AQ02539 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HIST1H1AQ02539 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms