Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC093019.1-201ENST00000443135 252 ntBASIC5.73□□□□□ -1.49
YBX1P67809 BMS1P10-201ENST00000443754 1120 ntBASIC5.73□□□□□ -1.49
YBX1P67809 DNAJC19P8-201ENST00000452887 259 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.73□□□□□ -1.49
YBX1P67809 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
YBX1P67809 RPS20P24-201ENST00000457473 361 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.73□□□□□ -1.49
YBX1P67809 AC083795.1-201ENST00000491760 320 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.73□□□□□ -1.49
YBX1P67809 RN7SL284P-201ENST00000498823 275 ntBASIC5.73□□□□□ -1.49
YBX1P67809 NDUFA5P12-201ENST00000503796 343 ntBASIC5.73□□□□□ -1.49
YBX1P67809 SUMO2P4-201ENST00000504193 276 ntBASIC5.73□□□□□ -1.49
YBX1P67809 PSMA2P2-201ENST00000504319 686 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AC106872.4-201ENST00000510050 523 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.73□□□□□ -1.49
YBX1P67809 PRMT5P1-201ENST00000514351 598 ntBASIC5.73□□□□□ -1.49
YBX1P67809 MTCO1P35-201ENST00000515270 228 ntBASIC5.73□□□□□ -1.49
YBX1P67809 RN7SKP288-201ENST00000516227 268 ntBASIC5.73□□□□□ -1.49
YBX1P67809 RN7SKP31-201ENST00000516354 278 ntBASIC5.73□□□□□ -1.49
YBX1P67809 CDC42P3-201ENST00000518493 633 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AP002748.2-201ENST00000528671 348 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.73□□□□□ -1.49
YBX1P67809 NANOGNBP2-201ENST00000544753 553 ntBASIC5.73□□□□□ -1.49
YBX1P67809 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.73□□□□□ -1.49
YBX1P67809 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.73□□□□□ -1.49
YBX1P67809 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.73□□□□□ -1.49
YBX1P67809 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.73□□□□□ -1.49
YBX1P67809 MIR3913-1-201ENST00000577744 102 ntBASIC5.73□□□□□ -1.49
YBX1P67809 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.73□□□□□ -1.49
YBX1P67809 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.73□□□□□ -1.49
YBX1P67809 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.73□□□□□ -1.49
YBX1P67809 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.73□□□□□ -1.49
YBX1P67809 AC012254.3-201ENST00000591183 2117 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AC020914.6-201ENST00000594327 272 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AC011445.2-201ENST00000599274 173 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AL138895.2-201ENST00000603019 178 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AC233280.2-201ENST00000603917 1070 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AC109309.2-201ENST00000612597 332 ntBASIC5.73□□□□□ -1.49
YBX1P67809 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.73□□□□□ -1.49
YBX1P67809 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.73□□□□□ -1.49
YBX1P67809 AL139089.1-201ENST00000620372 975 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AC073348.1-201ENST00000623002 331 ntBASIC5.73□□□□□ -1.49
YBX1P67809 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.73□□□□□ -1.49
YBX1P67809 AC079228.1-201ENST00000624774 1049 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AC120349.2-201ENST00000625002 298 ntBASIC5.73□□□□□ -1.49
YBX1P67809 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
YBX1P67809 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
YBX1P67809 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
YBX1P67809 AC109446.4-201ENST00000623235 2755 ntBASIC5.73□□□□□ -1.49
YBX1P67809 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
YBX1P67809 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
YBX1P67809 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
YBX1P67809 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
YBX1P67809 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
YBX1P67809 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
YBX1P67809 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
YBX1P67809 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
YBX1P67809 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
YBX1P67809 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
YBX1P67809 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
YBX1P67809 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
YBX1P67809 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
YBX1P67809 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
YBX1P67809 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.72□□□□□ -1.49
YBX1P67809 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
YBX1P67809 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
YBX1P67809 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.72□□□□□ -1.49
YBX1P67809 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
YBX1P67809 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
YBX1P67809 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
YBX1P67809 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
YBX1P67809 Y_RNA.160-201ENST00000363677 92 ntBASIC5.72□□□□□ -1.49
YBX1P67809 Y_RNA.296-201ENST00000364930 108 ntBASIC5.72□□□□□ -1.49
YBX1P67809 RNU6-692P-201ENST00000384496 107 ntBASIC5.72□□□□□ -1.49
YBX1P67809 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
YBX1P67809 RN7SKP229-201ENST00000410465 302 ntBASIC5.72□□□□□ -1.49
YBX1P67809 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.72□□□□□ -1.49
YBX1P67809 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.72□□□□□ -1.49
YBX1P67809 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.72□□□□□ -1.49
YBX1P67809 AL445928.1-201ENST00000435545 222 ntBASIC5.72□□□□□ -1.49
YBX1P67809 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.72□□□□□ -1.49
YBX1P67809 UBE2FP3-201ENST00000436366 524 ntBASIC5.72□□□□□ -1.49
YBX1P67809 PCBP2P1-201ENST00000437262 977 ntBASIC5.72□□□□□ -1.49
YBX1P67809 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.72□□□□□ -1.49
YBX1P67809 COX6CP18-201ENST00000448769 222 ntBASIC5.72□□□□□ -1.49
YBX1P67809 CFL1P4-201ENST00000451536 498 ntBASIC5.72□□□□□ -1.49
YBX1P67809 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.72□□□□□ -1.49
YBX1P67809 AL033528.1-201ENST00000453780 140 ntBASIC5.72□□□□□ -1.49
YBX1P67809 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.72□□□□□ -1.49
YBX1P67809 GEMIN2P1-201ENST00000454246 752 ntBASIC5.72□□□□□ -1.49
YBX1P67809 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.72□□□□□ -1.49
YBX1P67809 SETP20-201ENST00000457046 852 ntBASIC5.72□□□□□ -1.49
YBX1P67809 AC128716.1-201ENST00000475129 166 ntBASIC5.72□□□□□ -1.49
YBX1P67809 RPL38P3-201ENST00000484463 213 ntBASIC5.72□□□□□ -1.49
YBX1P67809 LARP1BP2-201ENST00000486594 519 ntBASIC5.72□□□□□ -1.49
YBX1P67809 COX6B1P2-201ENST00000489624 230 ntBASIC5.72□□□□□ -1.49
YBX1P67809 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.72□□□□□ -1.49
YBX1P67809 RNF138P1-201ENST00000502765 546 ntBASIC5.72□□□□□ -1.49
YBX1P67809 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.72□□□□□ -1.49
YBX1P67809 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms