Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.92□□□□□ -1.46
EPHB3P54753 RN7SKP298-201ENST00000515950 94 ntBASIC5.92□□□□□ -1.46
EPHB3P54753 SCARNA15.1-201ENST00000516384 125 ntBASIC5.92□□□□□ -1.46
EPHB3P54753 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
EPHB3P54753 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.92□□□□□ -1.46
EPHB3P54753 AL121839.1-201ENST00000556233 1185 ntBASIC5.92□□□□□ -1.46
EPHB3P54753 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.92□□□□□ -1.46
EPHB3P54753 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.92□□□□□ -1.46
EPHB3P54753 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.92□□□□□ -1.46
EPHB3P54753 AL138976.2-201ENST00000563989 694 ntBASIC5.92□□□□□ -1.46
EPHB3P54753 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.92□□□□□ -1.46
EPHB3P54753 MIR4311-201ENST00000580794 100 ntBASIC5.92□□□□□ -1.46
EPHB3P54753 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.92□□□□□ -1.46
EPHB3P54753 BMS1P7-201ENST00000602440 1052 ntBASIC5.92□□□□□ -1.46
EPHB3P54753 AC015871.2-201ENST00000603605 948 ntBASIC5.92□□□□□ -1.46
EPHB3P54753 NANOGP3-201ENST00000605855 286 ntBASIC5.92□□□□□ -1.46
EPHB3P54753 AC211433.2-201ENST00000608433 387 ntBASIC5.92□□□□□ -1.46
EPHB3P54753 AC099676.1-201ENST00000608886 657 ntBASIC5.92□□□□□ -1.46
EPHB3P54753 AC106028.5-201ENST00000610332 395 ntBASIC5.92□□□□□ -1.46
EPHB3P54753 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.92□□□□□ -1.46
EPHB3P54753 FER-210ENST00000628534 558 ntTSL 5 BASIC5.92□□□□□ -1.46
EPHB3P54753 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.92□□□□□ -1.46
EPHB3P54753 AL353743.4-201ENST00000422653 1547 ntBASIC5.92□□□□□ -1.46
EPHB3P54753 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.92□□□□□ -1.46
EPHB3P54753 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
EPHB3P54753 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
EPHB3P54753 AL157700.1-201ENST00000561973 1432 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.91□□□□□ -1.46
EPHB3P54753 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.91□□□□□ -1.46
EPHB3P54753 CBX3P1-201ENST00000325243 554 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 RNU4-12P-201ENST00000365233 139 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
EPHB3P54753 MIR551A-201ENST00000385042 96 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 Y_RNA.582-201ENST00000391023 95 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 RNU4-34P-201ENST00000410431 124 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 NRBF2P2-201ENST00000413087 861 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 TPT1P2-201ENST00000413105 503 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 RPL23AP39-201ENST00000415533 405 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
EPHB3P54753 AL034379.1-201ENST00000423216 253 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.91□□□□□ -1.46
EPHB3P54753 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
EPHB3P54753 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.91□□□□□ -1.46
EPHB3P54753 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.91□□□□□ -1.46
EPHB3P54753 AC092427.1-201ENST00000439177 601 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 USP9YP8-201ENST00000441913 500 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.91□□□□□ -1.46
EPHB3P54753 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.91□□□□□ -1.46
EPHB3P54753 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.91□□□□□ -1.46
EPHB3P54753 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.91□□□□□ -1.46
EPHB3P54753 ARL4AP2-201ENST00000507378 601 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 snoU109.5-201ENST00000516231 132 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 RNU6-314P-201ENST00000516574 104 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.91□□□□□ -1.46
EPHB3P54753 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.91□□□□□ -1.46
EPHB3P54753 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.91□□□□□ -1.46
EPHB3P54753 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.91□□□□□ -1.46
EPHB3P54753 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.91□□□□□ -1.46
EPHB3P54753 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.91□□□□□ -1.46
EPHB3P54753 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.91□□□□□ -1.46
EPHB3P54753 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.91□□□□□ -1.46
EPHB3P54753 AP001542.2-201ENST00000593141 364 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 AC012616.1-201ENST00000600294 197 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 AL513327.3-201ENST00000602618 469 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.91□□□□□ -1.46
EPHB3P54753 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.91□□□□□ -1.46
EPHB3P54753 AC090578.1-201ENST00000604955 591 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 AL352984.2-202ENST00000613699 155 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.91□□□□□ -1.46
EPHB3P54753 MIR3688-2-201ENST00000636963 87 ntBASIC5.91□□□□□ -1.46
EPHB3P54753 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
EPHB3P54753 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
EPHB3P54753 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
EPHB3P54753 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
EPHB3P54753 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
EPHB3P54753 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
EPHB3P54753 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
EPHB3P54753 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.9□□□□□ -1.46
EPHB3P54753 AC087516.1-201ENST00000561236 2428 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 PWAR1-201ENST00000624188 2414 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
EPHB3P54753 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
EPHB3P54753 AL592429.1-201ENST00000403909 1473 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
EPHB3P54753 AL590763.1-201ENST00000398297 1545 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
EPHB3P54753 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
EPHB3P54753 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
EPHB3P54753 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
EPHB3P54753 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
EPHB3P54753 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
EPHB3P54753 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
EPHB3P54753 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
EPHB3P54753 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
EPHB3P54753 Y_RNA.18-201ENST00000362461 102 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 RNA5SP27-201ENST00000363839 119 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 RNU6-707P-201ENST00000364647 95 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 RN7SKP6-201ENST00000364795 319 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms