Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
BRCA2P51587 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRCA2P51587 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.22□□□□□ -1.73
BRCA2P51587 AC011825.1-201ENST00000484967 388 ntBASIC4.22□□□□□ -1.73
BRCA2P51587 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
BRCA2P51587 NCAPGP2-201ENST00000557911 754 ntBASIC4.22□□□□□ -1.73
BRCA2P51587 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.22□□□□□ -1.73
BRCA2P51587 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.22□□□□□ -1.73
BRCA2P51587 AC104763.2-201ENST00000604179 382 ntBASIC4.22□□□□□ -1.73
BRCA2P51587 MIR7106-201ENST00000612419 65 ntBASIC4.22□□□□□ -1.73
BRCA2P51587 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
BRCA2P51587 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
BRCA2P51587 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.22□□□□□ -1.73
BRCA2P51587 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
BRCA2P51587 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
BRCA2P51587 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.73
BRCA2P51587 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
BRCA2P51587 MIR199A2-201ENST00000385289 110 ntBASIC4.21□□□□□ -1.73
BRCA2P51587 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
BRCA2P51587 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.21□□□□□ -1.73
BRCA2P51587 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.21□□□□□ -1.73
BRCA2P51587 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.21□□□□□ -1.73
BRCA2P51587 AC124068.1-201ENST00000563131 678 ntBASIC4.21□□□□□ -1.73
BRCA2P51587 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.21□□□□□ -1.73
BRCA2P51587 MIR5004-201ENST00000579078 107 ntBASIC4.21□□□□□ -1.73
BRCA2P51587 AC009303.3-201ENST00000591103 736 ntBASIC4.21□□□□□ -1.73
BRCA2P51587 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.21□□□□□ -1.73
BRCA2P51587 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.21□□□□□ -1.73
BRCA2P51587 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.21□□□□□ -1.73
BRCA2P51587 SNORD35B-201ENST00000363660 87 ntBASIC4.21□□□□□ -1.74
BRCA2P51587 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.21□□□□□ -1.74
BRCA2P51587 AL121878.1-201ENST00000418638 859 ntBASIC4.21□□□□□ -1.74
BRCA2P51587 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.21□□□□□ -1.74
BRCA2P51587 S100A11P2-201ENST00000467589 312 ntBASIC4.21□□□□□ -1.74
BRCA2P51587 RAC1P2-201ENST00000511164 579 ntBASIC4.21□□□□□ -1.74
BRCA2P51587 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.21□□□□□ -1.74
BRCA2P51587 AC103843.2-201ENST00000530523 682 ntBASIC4.21□□□□□ -1.74
BRCA2P51587 CR383656.14-201ENST00000551951 406 ntBASIC4.21□□□□□ -1.74
BRCA2P51587 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC4.21□□□□□ -1.74
BRCA2P51587 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
BRCA2P51587 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
BRCA2P51587 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
BRCA2P51587 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
BRCA2P51587 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
BRCA2P51587 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.21□□□□□ -1.74
BRCA2P51587 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.21□□□□□ -1.74
BRCA2P51587 AL161631.1-201ENST00000417933 486 ntBASIC4.21□□□□□ -1.74
BRCA2P51587 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
BRCA2P51587 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.21□□□□□ -1.74
BRCA2P51587 AC079171.1-201ENST00000568788 914 ntBASIC4.21□□□□□ -1.74
BRCA2P51587 AL451044.1-201ENST00000604867 238 ntBASIC4.21□□□□□ -1.74
BRCA2P51587 TUG1_1.1-201ENST00000610654 145 ntBASIC4.21□□□□□ -1.74
BRCA2P51587 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
BRCA2P51587 AC019278.1-201ENST00000623516 479 ntBASIC4.21□□□□□ -1.74
BRCA2P51587 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
BRCA2P51587 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
BRCA2P51587 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.21□□□□□ -1.74
BRCA2P51587 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
BRCA2P51587 AL365440.1-201ENST00000436135 2167 ntBASIC4.21□□□□□ -1.74
BRCA2P51587 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.2□□□□□ -1.74
BRCA2P51587 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRCA2P51587 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.2□□□□□ -1.74
BRCA2P51587 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRCA2P51587 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.2□□□□□ -1.74
BRCA2P51587 SNORD17-201ENST00000390930 237 ntBASIC4.2□□□□□ -1.74
BRCA2P51587 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.2□□□□□ -1.74
BRCA2P51587 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.2□□□□□ -1.74
BRCA2P51587 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRCA2P51587 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.2□□□□□ -1.74
BRCA2P51587 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.2□□□□□ -1.74
BRCA2P51587 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC4.2□□□□□ -1.74
BRCA2P51587 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
BRCA2P51587 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.2□□□□□ -1.74
BRCA2P51587 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRCA2P51587 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.2□□□□□ -1.74
BRCA2P51587 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
BRCA2P51587 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
BRCA2P51587 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
BRCA2P51587 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRCA2P51587 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
BRCA2P51587 Y_RNA.638-201ENST00000459374 113 ntBASIC4.2□□□□□ -1.74
BRCA2P51587 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.2□□□□□ -1.74
BRCA2P51587 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.2□□□□□ -1.74
BRCA2P51587 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.2□□□□□ -1.74
BRCA2P51587 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRCA2P51587 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.2□□□□□ -1.74
BRCA2P51587 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRCA2P51587 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.2□□□□□ -1.74
BRCA2P51587 SNORD96B-201ENST00000386148 79 ntBASIC4.2□□□□□ -1.74
BRCA2P51587 SNORA3C-201ENST00000408792 125 ntBASIC4.2□□□□□ -1.74
BRCA2P51587 AL671855.1-201ENST00000446875 1203 ntBASIC4.2□□□□□ -1.74
BRCA2P51587 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.2□□□□□ -1.74
BRCA2P51587 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.2□□□□□ -1.74
BRCA2P51587 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.2□□□□□ -1.74
BRCA2P51587 AC104984.5-201ENST00000586878 94 ntBASIC4.2□□□□□ -1.74
BRCA2P51587 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRCA2P51587 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.19□□□□□ -1.74
BRCA2P51587 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
BRCA2P51587 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
BRCA2P51587 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms