Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 COX6B1P7-201ENST00000430845 235 ntBASIC4.59□□□□□ -1.67
BRCC3P46736 SPATA2P1-201ENST00000431223 2055 ntBASIC4.59□□□□□ -1.67
BRCC3P46736 BTF3P10-201ENST00000433415 495 ntBASIC4.59□□□□□ -1.67
BRCC3P46736 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.59□□□□□ -1.67
BRCC3P46736 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BRCC3P46736 EEF1A1P1-201ENST00000447052 739 ntBASIC4.59□□□□□ -1.67
BRCC3P46736 EIF2S2P4-201ENST00000461070 984 ntBASIC4.59□□□□□ -1.67
BRCC3P46736 ATP5G1P3-201ENST00000463301 410 ntBASIC4.59□□□□□ -1.67
BRCC3P46736 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.59□□□□□ -1.67
BRCC3P46736 AC022795.1-201ENST00000473808 480 ntBASIC4.59□□□□□ -1.67
BRCC3P46736 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BRCC3P46736 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BRCC3P46736 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.59□□□□□ -1.67
BRCC3P46736 AL352979.3-201ENST00000553515 247 ntBASIC4.59□□□□□ -1.67
BRCC3P46736 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
BRCC3P46736 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.59□□□□□ -1.67
BRCC3P46736 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.59□□□□□ -1.67
BRCC3P46736 AC090948.2-201ENST00000607363 564 ntBASIC4.59□□□□□ -1.67
BRCC3P46736 SNX18P1Y-201ENST00000616231 511 ntBASIC4.59□□□□□ -1.67
BRCC3P46736 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.59□□□□□ -1.67
BRCC3P46736 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
BRCC3P46736 AC090506.2-201ENST00000624521 419 ntBASIC4.59□□□□□ -1.67
BRCC3P46736 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.59□□□□□ -1.67
BRCC3P46736 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.59□□□□□ -1.67
BRCC3P46736 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.59□□□□□ -1.67
BRCC3P46736 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
BRCC3P46736 OR51C1P-202ENST00000641159 1444 ntBASIC4.59□□□□□ -1.67
BRCC3P46736 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
BRCC3P46736 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.59□□□□□ -1.68
BRCC3P46736 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.59□□□□□ -1.68
BRCC3P46736 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BRCC3P46736 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRCC3P46736 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
BRCC3P46736 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
BRCC3P46736 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BRCC3P46736 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRCC3P46736 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BRCC3P46736 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.58□□□□□ -1.68
BRCC3P46736 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRCC3P46736 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.58□□□□□ -1.68
BRCC3P46736 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRCC3P46736 SNORA57.1-201ENST00000391227 145 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 CEACAMP1-201ENST00000434624 1035 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 Z99127.2-201ENST00000441426 334 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.58□□□□□ -1.68
BRCC3P46736 VN1R48P-201ENST00000448149 1036 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.58□□□□□ -1.68
BRCC3P46736 BUD31P2-201ENST00000449374 300 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 RPS20P4-201ENST00000461659 355 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
BRCC3P46736 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.58□□□□□ -1.68
BRCC3P46736 RPS27AP13-201ENST00000498403 237 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.58□□□□□ -1.68
BRCC3P46736 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.58□□□□□ -1.68
BRCC3P46736 KCTD9P2-201ENST00000512203 1013 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 RNU6-491P-201ENST00000516099 110 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.58□□□□□ -1.68
BRCC3P46736 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.58□□□□□ -1.68
BRCC3P46736 AC122134.1-201ENST00000565664 1104 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 RPL23AP97-201ENST00000568955 471 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.58□□□□□ -1.68
BRCC3P46736 VN1R85P-201ENST00000601587 426 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 AC005034.4-201ENST00000603612 899 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 HMGB1P51-201ENST00000605166 638 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 AC019131.2-201ENST00000609071 870 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 AC084036.1-201ENST00000609190 508 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.58□□□□□ -1.68
BRCC3P46736 AC004241.3-201ENST00000611728 517 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 FAM27D1-201ENST00000612308 341 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.58□□□□□ -1.68
BRCC3P46736 AC006213.5-201ENST00000619673 288 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 AP001005.3-201ENST00000622049 129 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 AC005086.4-201ENST00000623065 213 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 AC073592.7-201ENST00000623659 507 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 AC008013.2-202ENST00000637965 364 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 AC119674.1-220ENST00000641502 1048 ntBASIC4.58□□□□□ -1.68
BRCC3P46736 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRCC3P46736 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.58□□□□□ -1.68
BRCC3P46736 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.57□□□□□ -1.68
BRCC3P46736 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
BRCC3P46736 AP001002.1-201ENST00000625148 1513 ntBASIC4.57□□□□□ -1.68
BRCC3P46736 SPRR2C-201ENST00000290702 219 ntBASIC4.57□□□□□ -1.68
BRCC3P46736 MIR372-201ENST00000362225 67 ntBASIC4.57□□□□□ -1.68
BRCC3P46736 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.57□□□□□ -1.68
BRCC3P46736 RNU1-44P-201ENST00000384453 163 ntBASIC4.57□□□□□ -1.68
BRCC3P46736 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.57□□□□□ -1.68
BRCC3P46736 MIR1911-201ENST00000410783 80 ntBASIC4.57□□□□□ -1.68
BRCC3P46736 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.57□□□□□ -1.68
BRCC3P46736 VDAC1P6-201ENST00000430062 855 ntBASIC4.57□□□□□ -1.68
BRCC3P46736 AC114878.1-201ENST00000441166 358 ntBASIC4.57□□□□□ -1.68
BRCC3P46736 AL606490.8-201ENST00000441624 319 ntBASIC4.57□□□□□ -1.68
BRCC3P46736 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.57□□□□□ -1.68
BRCC3P46736 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BRCC3P46736 AL445433.1-201ENST00000457507 257 ntBASIC4.57□□□□□ -1.68
BRCC3P46736 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.57□□□□□ -1.68
BRCC3P46736 AC090013.1-201ENST00000485147 480 ntBASIC4.57□□□□□ -1.68
BRCC3P46736 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.57□□□□□ -1.68
BRCC3P46736 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.57□□□□□ -1.68
BRCC3P46736 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms