Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
GRIK1P39086 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
GRIK1P39086 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
GRIK1P39086 Z95114.1-201ENST00000624264 14574 ntBASIC6.4□□□□□ -1.39
GRIK1P39086 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.39
GRIK1P39086 ZNF733P-202ENST00000444809 1573 ntBASIC6.4□□□□□ -1.39
GRIK1P39086 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
GRIK1P39086 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
GRIK1P39086 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GRIK1P39086 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
GRIK1P39086 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.39□□□□□ -1.39
GRIK1P39086 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GRIK1P39086 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GRIK1P39086 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.39□□□□□ -1.39
GRIK1P39086 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GRIK1P39086 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GRIK1P39086 RNA5SP273-201ENST00000362484 113 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 Y_RNA.302-201ENST00000364997 102 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 AP003170.5-201ENST00000397185 335 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 CYCSP45-201ENST00000402289 315 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.39□□□□□ -1.39
GRIK1P39086 AC010385.1-201ENST00000412374 256 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.39□□□□□ -1.39
GRIK1P39086 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.39□□□□□ -1.39
GRIK1P39086 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.39□□□□□ -1.39
GRIK1P39086 AC007568.1-201ENST00000422912 471 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 RPL31P54-201ENST00000429803 370 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GRIK1P39086 HMGB3P10-201ENST00000434734 572 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 FMO7P-201ENST00000436045 768 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 AL451074.3-201ENST00000437709 472 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.39□□□□□ -1.39
GRIK1P39086 DNAJC19P5-201ENST00000443295 316 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 AC097499.1-201ENST00000444277 208 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 RPL23AP60-201ENST00000450011 454 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 AC079776.3-201ENST00000450665 370 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.39□□□□□ -1.39
GRIK1P39086 AC093166.4-201ENST00000457867 318 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 RPL7AP52-201ENST00000458096 790 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GRIK1P39086 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.39□□□□□ -1.39
GRIK1P39086 CDH12P2-201ENST00000504393 298 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
GRIK1P39086 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
GRIK1P39086 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.39□□□□□ -1.39
GRIK1P39086 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GRIK1P39086 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.39□□□□□ -1.39
GRIK1P39086 AC093677.1-201ENST00000514414 678 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 Y_RNA.667-201ENST00000516212 107 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 RNA5SP438-201ENST00000516561 112 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.39□□□□□ -1.39
GRIK1P39086 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.39□□□□□ -1.39
GRIK1P39086 AC060775.1-201ENST00000518241 520 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.39□□□□□ -1.39
GRIK1P39086 AC092747.2-201ENST00000545069 983 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.39□□□□□ -1.39
GRIK1P39086 AC020661.2-201ENST00000560114 134 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.39□□□□□ -1.39
GRIK1P39086 HMGB1P33-201ENST00000563485 527 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.39□□□□□ -1.39
GRIK1P39086 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.39□□□□□ -1.39
GRIK1P39086 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.39□□□□□ -1.39
GRIK1P39086 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.39□□□□□ -1.39
GRIK1P39086 AL512605.2-201ENST00000592972 256 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.39□□□□□ -1.39
GRIK1P39086 AC091488.1-201ENST00000604239 660 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 AL136295.6-201ENST00000610486 658 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 AL158196.1-201ENST00000616786 434 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 AP004607.9-201ENST00000618202 316 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 TTK-211ENST00000627129 240 ntTSL 5 BASIC6.39□□□□□ -1.39
GRIK1P39086 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GRIK1P39086 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GRIK1P39086 GNL2P1-201ENST00000451274 2190 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 MTND5P1-201ENST00000445440 1375 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GRIK1P39086 RBPJP7-201ENST00000442803 1447 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 RBPJP5-201ENST00000449433 1447 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
GRIK1P39086 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
GRIK1P39086 AL590763.1-201ENST00000398297 1545 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 SHQ1P1-201ENST00000437111 1544 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 AF287957.1-201ENST00000607368 1595 ntBASIC6.39□□□□□ -1.39
GRIK1P39086 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GRIK1P39086 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
GRIK1P39086 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.39□□□□□ -1.39
GRIK1P39086 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.38□□□□□ -1.39
GRIK1P39086 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.38□□□□□ -1.39
GRIK1P39086 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GRIK1P39086 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.38□□□□□ -1.39
GRIK1P39086 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GRIK1P39086 MAPK10-261ENST00000641050 3109 ntBASIC6.38□□□□□ -1.39
GRIK1P39086 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
GRIK1P39086 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
GRIK1P39086 OR10R3P-201ENST00000361688 942 ntBASIC6.38□□□□□ -1.39
GRIK1P39086 RNU5F-7P-201ENST00000363696 115 ntBASIC6.38□□□□□ -1.39
GRIK1P39086 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.38□□□□□ -1.39
GRIK1P39086 AC104297.1-201ENST00000393779 870 ntBASIC6.38□□□□□ -1.39
GRIK1P39086 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
GRIK1P39086 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.38□□□□□ -1.39
GRIK1P39086 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms