Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.37□□□□□ -1.71
FDFT1P37268 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.37□□□□□ -1.71
FDFT1P37268 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FDFT1P37268 AC140479.6-201ENST00000633535 357 ntBASIC4.37□□□□□ -1.71
FDFT1P37268 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.37□□□□□ -1.71
FDFT1P37268 MAPK10-253ENST00000641010 4072 ntBASIC4.37□□□□□ -1.71
FDFT1P37268 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
FDFT1P37268 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FDFT1P37268 AC097504.1-201ENST00000515103 2415 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
FDFT1P37268 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
FDFT1P37268 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
FDFT1P37268 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FDFT1P37268 RPL23AP59-201ENST00000399415 461 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 MIR1179-201ENST00000408703 91 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.36□□□□□ -1.71
FDFT1P37268 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.36□□□□□ -1.71
FDFT1P37268 AJ239321.1-201ENST00000424255 564 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 HMGB1P32-201ENST00000425971 565 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 RPL23AP1-201ENST00000428990 471 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 ELOCP18-201ENST00000434209 337 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.36□□□□□ -1.71
FDFT1P37268 AL772161.1-201ENST00000439130 476 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.36□□□□□ -1.71
FDFT1P37268 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.36□□□□□ -1.71
FDFT1P37268 RPL23AP81-201ENST00000455252 467 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 RN7SL585P-201ENST00000470538 280 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 BNIP3P41-201ENST00000503774 571 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.36□□□□□ -1.71
FDFT1P37268 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.36□□□□□ -1.71
FDFT1P37268 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.36□□□□□ -1.71
FDFT1P37268 AC090515.3-201ENST00000560431 315 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 AC068020.1-201ENST00000594215 661 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
FDFT1P37268 AL354984.3-201ENST00000604803 325 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 AC024940.4-201ENST00000605507 246 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.36□□□□□ -1.71
FDFT1P37268 AC100827.5-201ENST00000615883 426 ntBASIC4.36□□□□□ -1.71
FDFT1P37268 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.36□□□□□ -1.71
FDFT1P37268 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.36□□□□□ -1.71
FDFT1P37268 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
FDFT1P37268 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.36□□□□□ -1.71
FDFT1P37268 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FDFT1P37268 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.36□□□□□ -1.71
FDFT1P37268 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FDFT1P37268 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
FDFT1P37268 AC114546.3-201ENST00000623582 1734 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FDFT1P37268 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.35□□□□□ -1.71
FDFT1P37268 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
FDFT1P37268 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FDFT1P37268 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FDFT1P37268 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
FDFT1P37268 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FDFT1P37268 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FDFT1P37268 RNA5SP388-201ENST00000362584 119 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FDFT1P37268 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
FDFT1P37268 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FDFT1P37268 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.35□□□□□ -1.71
FDFT1P37268 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FDFT1P37268 TRGV6-201ENST00000417928 299 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.35□□□□□ -1.71
FDFT1P37268 RBMY2KP-201ENST00000418221 992 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 AC048351.1-201ENST00000420064 602 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.35□□□□□ -1.71
FDFT1P37268 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.35□□□□□ -1.71
FDFT1P37268 RPL23AP89-201ENST00000439324 255 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 AL357520.1-201ENST00000441557 453 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 PHBP16-201ENST00000446318 950 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 PPIAP21-201ENST00000464473 501 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 AC104629.2-201ENST00000468627 598 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 RPL23AP2-201ENST00000471227 466 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 RNU6-347P-201ENST00000516658 105 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 RNA5SP73-201ENST00000516744 108 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 RN7SKP92-201ENST00000517266 244 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.35□□□□□ -1.71
FDFT1P37268 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.35□□□□□ -1.71
FDFT1P37268 UBTFL9-201ENST00000534504 1148 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.35□□□□□ -1.71
FDFT1P37268 TRAV11-201ENST00000539512 339 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 AC063949.1-201ENST00000552900 865 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.35□□□□□ -1.71
FDFT1P37268 AC051619.2-201ENST00000559063 397 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 AC027176.2-201ENST00000559166 746 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 AC084757.1-201ENST00000559987 490 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.35□□□□□ -1.71
FDFT1P37268 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FDFT1P37268 RPL12P25-202ENST00000598100 674 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 AC093765.1-201ENST00000603758 881 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 AC090948.1-201ENST00000607464 549 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.35□□□□□ -1.71
FDFT1P37268 AC008785.1-201ENST00000624475 456 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.35□□□□□ -1.71
FDFT1P37268 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 AL132640.2-201ENST00000559968 1698 ntBASIC4.35□□□□□ -1.71
FDFT1P37268 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.35□□□□□ -1.71
FDFT1P37268 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
FDFT1P37268 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms