Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.06□□□□□ -1.44
CNGA1P29973 GAPDHP14-201ENST00000450472 937 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 AC092647.2-201ENST00000452998 253 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 AC099560.2-201ENST00000457554 255 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 GLUD1P3-202ENST00000508551 200 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CNGA1P29973 BNIP3P1-201ENST00000547295 580 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 AC010198.2-201ENST00000550612 259 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.06□□□□□ -1.44
CNGA1P29973 AC087465.1-201ENST00000560574 245 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 AC009852.2-201ENST00000567898 485 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.06□□□□□ -1.44
CNGA1P29973 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CNGA1P29973 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.06□□□□□ -1.44
CNGA1P29973 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 AC009597.2-201ENST00000604659 592 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.06□□□□□ -1.44
CNGA1P29973 AC080013.3-201ENST00000606839 578 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 AC093799.2-201ENST00000610062 578 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 MIR378J-201ENST00000611988 109 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 AL450489.1-201ENST00000612071 468 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 BNIP3P41-202ENST00000616656 861 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.06□□□□□ -1.44
CNGA1P29973 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.06□□□□□ -1.44
CNGA1P29973 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNGA1P29973 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
CNGA1P29973 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNGA1P29973 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CNGA1P29973 TRIM51GP-201ENST00000534741 1350 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CNGA1P29973 DCAF13P3-201ENST00000561147 1334 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CNGA1P29973 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNGA1P29973 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNGA1P29973 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNGA1P29973 AC013442.1-201ENST00000397347 228 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 AL121878.1-201ENST00000418638 859 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC6.05□□□□□ -1.44
CNGA1P29973 RPL7P44-201ENST00000424827 742 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.05□□□□□ -1.44
CNGA1P29973 MTND5P25-201ENST00000430499 799 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 LINC02210-201ENST00000444561 288 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.05□□□□□ -1.44
CNGA1P29973 Z83846.1-201ENST00000446798 265 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.05□□□□□ -1.44
CNGA1P29973 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.05□□□□□ -1.44
CNGA1P29973 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.05□□□□□ -1.44
CNGA1P29973 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.05□□□□□ -1.44
CNGA1P29973 GTF2F2P1-201ENST00000511083 675 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 AC109464.1-201ENST00000511091 819 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 AC008837.2-201ENST00000513076 418 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 HIGD1AP6-201ENST00000521833 279 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.05□□□□□ -1.44
CNGA1P29973 PDCL2P2-201ENST00000533651 189 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.05□□□□□ -1.44
CNGA1P29973 EMP1-206ENST00000537612 505 ntTSL 3 BASIC6.05□□□□□ -1.44
CNGA1P29973 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.05□□□□□ -1.44
CNGA1P29973 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.05□□□□□ -1.44
CNGA1P29973 AC011487.3-201ENST00000593607 453 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.05□□□□□ -1.44
CNGA1P29973 AP003973.1-201ENST00000604639 691 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 DPRXP5-201ENST00000604662 539 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 AC015804.1-201ENST00000622935 435 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 AC112694.2-201ENST00000623697 768 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 AL049737.1-201ENST00000413920 1403 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CNGA1P29973 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNGA1P29973 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.05□□□□□ -1.44
CNGA1P29973 ECM1P2-201ENST00000503354 1577 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CNGA1P29973 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CNGA1P29973 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNGA1P29973 AL603750.1-201ENST00000624216 1717 ntBASIC6.05□□□□□ -1.44
CNGA1P29973 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CNGA1P29973 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
CNGA1P29973 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.04□□□□□ -1.44
CNGA1P29973 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNGA1P29973 AL078621.3-201ENST00000623707 2042 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
CNGA1P29973 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNGA1P29973 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.04□□□□□ -1.44
CNGA1P29973 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CNGA1P29973 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNGA1P29973 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNGA1P29973 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CNGA1P29973 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNGA1P29973 AC114774.1-201ENST00000507410 1770 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNGA1P29973 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC6.04□□□□□ -1.44
CNGA1P29973 GJA6P-201ENST00000415117 1042 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 Z93242.1-201ENST00000427102 353 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 RPL7P56-201ENST00000429441 717 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 USP9YP31-201ENST00000431405 881 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.04□□□□□ -1.44
CNGA1P29973 RPL12P17-201ENST00000432393 498 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 AC092013.1-201ENST00000438795 332 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 OR6K5P-201ENST00000447050 945 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 COX6CP18-201ENST00000448769 222 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms