Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 GVINP1-202ENST00000531871 7271 ntBASIC4.72□□□□□ -1.65
COL4A5P29400 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.72□□□□□ -1.65
COL4A5P29400 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
COL4A5P29400 AL358178.1-201ENST00000407698 397 ntBASIC4.72□□□□□ -1.65
COL4A5P29400 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.72□□□□□ -1.65
COL4A5P29400 RBMY1KP-201ENST00000423480 476 ntBASIC4.72□□□□□ -1.65
COL4A5P29400 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A5P29400 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.72□□□□□ -1.65
COL4A5P29400 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.72□□□□□ -1.65
COL4A5P29400 SETP6-201ENST00000479329 568 ntBASIC4.72□□□□□ -1.65
COL4A5P29400 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.72□□□□□ -1.65
COL4A5P29400 RN7SKP13-201ENST00000515933 244 ntBASIC4.72□□□□□ -1.65
COL4A5P29400 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.72□□□□□ -1.65
COL4A5P29400 AC079171.1-201ENST00000568788 914 ntBASIC4.72□□□□□ -1.65
COL4A5P29400 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.72□□□□□ -1.65
COL4A5P29400 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.72□□□□□ -1.65
COL4A5P29400 AC024023.1-201ENST00000624530 922 ntBASIC4.72□□□□□ -1.65
COL4A5P29400 AC010480.1-201ENST00000624823 684 ntBASIC4.72□□□□□ -1.65
COL4A5P29400 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A5P29400 ZNF833P-201ENST00000424938 1494 ntBASIC4.72□□□□□ -1.65
COL4A5P29400 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A5P29400 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A5P29400 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
COL4A5P29400 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
COL4A5P29400 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.71□□□□□ -1.66
COL4A5P29400 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
COL4A5P29400 RNA5SP267-201ENST00000364893 126 ntBASIC4.71□□□□□ -1.66
COL4A5P29400 OR6K3-202ENST00000368146 996 ntBASIC4.71□□□□□ -1.66
COL4A5P29400 RNU2-65P-201ENST00000410162 185 ntBASIC4.71□□□□□ -1.66
COL4A5P29400 CTSL3P-202ENST00000412179 788 ntBASIC4.71□□□□□ -1.66
COL4A5P29400 ATP5A1P2-201ENST00000412323 255 ntBASIC4.71□□□□□ -1.66
COL4A5P29400 VTI1BP4-201ENST00000427516 527 ntBASIC4.71□□□□□ -1.66
COL4A5P29400 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.71□□□□□ -1.66
COL4A5P29400 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.71□□□□□ -1.66
COL4A5P29400 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.71□□□□□ -1.66
COL4A5P29400 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.71□□□□□ -1.66
COL4A5P29400 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC4.71□□□□□ -1.66
COL4A5P29400 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.71□□□□□ -1.66
COL4A5P29400 AL138721.1-201ENST00000616756 179 ntBASIC4.71□□□□□ -1.66
COL4A5P29400 AC138907.10-201ENST00000623708 983 ntBASIC4.71□□□□□ -1.66
COL4A5P29400 ZNF962P-201ENST00000443465 3140 ntBASIC4.71□□□□□ -1.66
COL4A5P29400 AP002512.4-202ENST00000641599 4530 ntBASIC4.71□□□□□ -1.66
COL4A5P29400 AP000432.2-201ENST00000624164 2048 ntBASIC4.71□□□□□ -1.66
COL4A5P29400 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A5P29400 AP002001.2-201ENST00000529025 1469 ntBASIC4.7□□□□□ -1.66
COL4A5P29400 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A5P29400 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
COL4A5P29400 SNORA3.3-201ENST00000408712 125 ntBASIC4.7□□□□□ -1.66
COL4A5P29400 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.7□□□□□ -1.66
COL4A5P29400 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A5P29400 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A5P29400 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.7□□□□□ -1.66
COL4A5P29400 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A5P29400 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.7□□□□□ -1.66
COL4A5P29400 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.7□□□□□ -1.66
COL4A5P29400 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.7□□□□□ -1.66
COL4A5P29400 RN7SKP83-201ENST00000516512 178 ntBASIC4.7□□□□□ -1.66
COL4A5P29400 OR5B10P-201ENST00000532869 642 ntBASIC4.7□□□□□ -1.66
COL4A5P29400 AC084759.1-201ENST00000561168 290 ntBASIC4.7□□□□□ -1.66
COL4A5P29400 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.7□□□□□ -1.66
COL4A5P29400 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.7□□□□□ -1.66
COL4A5P29400 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.7□□□□□ -1.66
COL4A5P29400 AC079684.1-201ENST00000621405 437 ntBASIC4.7□□□□□ -1.66
COL4A5P29400 AP005264.7-201ENST00000625003 745 ntBASIC4.7□□□□□ -1.66
COL4A5P29400 AL392088.2-201ENST00000637607 285 ntBASIC4.7□□□□□ -1.66
COL4A5P29400 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
COL4A5P29400 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
COL4A5P29400 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A5P29400 MAPK10-286ENST00000641208 8747 ntBASIC4.7□□□□□ -1.66
COL4A5P29400 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A5P29400 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
COL4A5P29400 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.7□□□□□ -1.66
COL4A5P29400 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A5P29400 AC008481.1-201ENST00000463278 396 ntBASIC4.7□□□□□ -1.66
COL4A5P29400 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A5P29400 AC092354.2-201ENST00000607786 514 ntBASIC4.7□□□□□ -1.66
COL4A5P29400 AC140113.4-201ENST00000622087 222 ntBASIC4.7□□□□□ -1.66
COL4A5P29400 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A5P29400 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.7□□□□□ -1.66
COL4A5P29400 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A5P29400 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL4A5P29400 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL4A5P29400 AC006971.1-201ENST00000407916 4486 ntBASIC4.69□□□□□ -1.66
COL4A5P29400 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL4A5P29400 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
COL4A5P29400 MARK2P15-201ENST00000432204 2186 ntBASIC4.69□□□□□ -1.66
COL4A5P29400 MFSD8-236ENST00000641509 4050 ntBASIC4.69□□□□□ -1.66
COL4A5P29400 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL4A5P29400 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.69□□□□□ -1.66
COL4A5P29400 MIR199A2-201ENST00000385289 110 ntBASIC4.69□□□□□ -1.66
COL4A5P29400 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.69□□□□□ -1.66
COL4A5P29400 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.69□□□□□ -1.66
COL4A5P29400 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.69□□□□□ -1.66
COL4A5P29400 RN7SKP18-201ENST00000516005 275 ntBASIC4.69□□□□□ -1.66
COL4A5P29400 AC079880.2-201ENST00000603790 1213 ntBASIC4.69□□□□□ -1.66
COL4A5P29400 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.69□□□□□ -1.66
COL4A5P29400 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.69□□□□□ -1.66
COL4A5P29400 AC026368.1-201ENST00000614934 690 ntBASIC4.69□□□□□ -1.66
COL4A5P29400 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.69□□□□□ -1.66
COL4A5P29400 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms