Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHC1P29353 RNU6-1257P-201ENST00000384625 110 ntBASIC4.14□□□□□ -1.75
SHC1P29353 RNA5SP332-201ENST00000391063 115 ntBASIC4.14□□□□□ -1.75
SHC1P29353 RNA5SP397-201ENST00000391323 118 ntBASIC4.14□□□□□ -1.75
SHC1P29353 RPL37P18-201ENST00000411602 243 ntBASIC4.14□□□□□ -1.75
SHC1P29353 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.14□□□□□ -1.75
SHC1P29353 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.14□□□□□ -1.75
SHC1P29353 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.14□□□□□ -1.75
SHC1P29353 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.14□□□□□ -1.75
SHC1P29353 AL935212.3-201ENST00000450729 284 ntBASIC4.14□□□□□ -1.75
SHC1P29353 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.14□□□□□ -1.75
SHC1P29353 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
SHC1P29353 AC098862.1-201ENST00000504991 413 ntBASIC4.14□□□□□ -1.75
SHC1P29353 AC098799.3-201ENST00000506095 438 ntBASIC4.14□□□□□ -1.75
SHC1P29353 MTCO1P31-201ENST00000506355 492 ntBASIC4.14□□□□□ -1.75
SHC1P29353 HMGB1P47-201ENST00000511281 589 ntBASIC4.14□□□□□ -1.75
SHC1P29353 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHC1P29353 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.14□□□□□ -1.75
SHC1P29353 MTCO3P27-201ENST00000514397 196 ntBASIC4.14□□□□□ -1.75
SHC1P29353 RNA5SP446-201ENST00000515955 82 ntBASIC4.14□□□□□ -1.75
SHC1P29353 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.14□□□□□ -1.75
SHC1P29353 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
SHC1P29353 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.14□□□□□ -1.75
SHC1P29353 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.14□□□□□ -1.75
SHC1P29353 AC104115.2-201ENST00000523026 687 ntBASIC4.14□□□□□ -1.75
SHC1P29353 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.14□□□□□ -1.75
SHC1P29353 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.14□□□□□ -1.75
SHC1P29353 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.14□□□□□ -1.75
SHC1P29353 AL049838.1-201ENST00000563647 981 ntBASIC4.14□□□□□ -1.75
SHC1P29353 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.14□□□□□ -1.75
SHC1P29353 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.14□□□□□ -1.75
SHC1P29353 MIR4700-201ENST00000578311 74 ntBASIC4.14□□□□□ -1.75
SHC1P29353 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.14□□□□□ -1.75
SHC1P29353 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.14□□□□□ -1.75
SHC1P29353 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.14□□□□□ -1.75
SHC1P29353 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.14□□□□□ -1.75
SHC1P29353 AL121652.1-201ENST00000608851 448 ntBASIC4.14□□□□□ -1.75
SHC1P29353 AC018926.1-201ENST00000616335 435 ntBASIC4.14□□□□□ -1.75
SHC1P29353 AP000346.3-201ENST00000622821 210 ntBASIC4.14□□□□□ -1.75
SHC1P29353 AC021106.3-201ENST00000623925 531 ntBASIC4.14□□□□□ -1.75
SHC1P29353 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SHC1P29353 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.14□□□□□ -1.75
SHC1P29353 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.14□□□□□ -1.75
SHC1P29353 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.14□□□□□ -1.75
SHC1P29353 AC108467.2-201ENST00000617640 1597 ntBASIC4.14□□□□□ -1.75
SHC1P29353 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHC1P29353 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.14□□□□□ -1.75
SHC1P29353 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHC1P29353 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SHC1P29353 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SHC1P29353 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.13□□□□□ -1.75
SHC1P29353 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHC1P29353 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.13□□□□□ -1.75
SHC1P29353 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHC1P29353 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHC1P29353 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHC1P29353 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SHC1P29353 MIR192-201ENST00000384915 110 ntBASIC4.13□□□□□ -1.75
SHC1P29353 GLULP6-201ENST00000399502 913 ntBASIC4.13□□□□□ -1.75
SHC1P29353 AC233289.1-201ENST00000403700 508 ntBASIC4.13□□□□□ -1.75
SHC1P29353 RPS3AP25-201ENST00000411660 793 ntBASIC4.13□□□□□ -1.75
SHC1P29353 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHC1P29353 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.13□□□□□ -1.75
SHC1P29353 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.13□□□□□ -1.75
SHC1P29353 ARL2BPP3-201ENST00000421226 480 ntBASIC4.13□□□□□ -1.75
SHC1P29353 RPL21P43-201ENST00000425440 472 ntBASIC4.13□□□□□ -1.75
SHC1P29353 RPEP3-201ENST00000425462 676 ntBASIC4.13□□□□□ -1.75
SHC1P29353 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.13□□□□□ -1.75
SHC1P29353 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.13□□□□□ -1.75
SHC1P29353 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.13□□□□□ -1.75
SHC1P29353 ARL5AP3-201ENST00000439327 386 ntBASIC4.13□□□□□ -1.75
SHC1P29353 YWHAZP2-201ENST00000440317 728 ntBASIC4.13□□□□□ -1.75
SHC1P29353 TPTE2P3-201ENST00000441562 1189 ntBASIC4.13□□□□□ -1.75
SHC1P29353 AC098826.2-201ENST00000452011 651 ntBASIC4.13□□□□□ -1.75
SHC1P29353 ISCUP1-201ENST00000454451 448 ntBASIC4.13□□□□□ -1.75
SHC1P29353 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.13□□□□□ -1.75
SHC1P29353 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.13□□□□□ -1.75
SHC1P29353 RPS29P22-201ENST00000472363 168 ntBASIC4.13□□□□□ -1.75
SHC1P29353 OR52A4P-201ENST00000472867 958 ntBASIC4.13□□□□□ -1.75
SHC1P29353 RPS3AP6-201ENST00000484430 795 ntBASIC4.13□□□□□ -1.75
SHC1P29353 AC108022.1-201ENST00000493466 478 ntBASIC4.13□□□□□ -1.75
SHC1P29353 AP003355.1-201ENST00000518956 587 ntBASIC4.13□□□□□ -1.75
SHC1P29353 IGLV3-26-201ENST00000520756 302 ntBASIC4.13□□□□□ -1.75
SHC1P29353 MTND2P32-201ENST00000521584 1038 ntBASIC4.13□□□□□ -1.75
SHC1P29353 OR4V1P-201ENST00000525394 1140 ntBASIC4.13□□□□□ -1.75
SHC1P29353 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.13□□□□□ -1.75
SHC1P29353 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SHC1P29353 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.13□□□□□ -1.75
SHC1P29353 AC233266.2-201ENST00000567067 528 ntBASIC4.13□□□□□ -1.75
SHC1P29353 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.13□□□□□ -1.75
SHC1P29353 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.13□□□□□ -1.75
SHC1P29353 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.13□□□□□ -1.75
SHC1P29353 AL133338.2-201ENST00000604292 736 ntBASIC4.13□□□□□ -1.75
SHC1P29353 AC112220.2-201ENST00000605513 533 ntBASIC4.13□□□□□ -1.75
SHC1P29353 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.13□□□□□ -1.75
SHC1P29353 AP001005.3-201ENST00000622049 129 ntBASIC4.13□□□□□ -1.75
SHC1P29353 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.13□□□□□ -1.75
SHC1P29353 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SHC1P29353 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.13□□□□□ -1.75
SHC1P29353 AC091046.3-201ENST00000631455 1574 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms