Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.93□□□□□ -1.62
CAPN3P20807 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CAPN3P20807 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CAPN3P20807 HMGN3P1-201ENST00000453847 193 ntBASIC4.93□□□□□ -1.62
CAPN3P20807 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CAPN3P20807 SNRPCP2-201ENST00000504370 475 ntBASIC4.93□□□□□ -1.62
CAPN3P20807 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.93□□□□□ -1.62
CAPN3P20807 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.93□□□□□ -1.62
CAPN3P20807 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.93□□□□□ -1.62
CAPN3P20807 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.93□□□□□ -1.62
CAPN3P20807 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CAPN3P20807 MTND5P21-201ENST00000531961 522 ntBASIC4.93□□□□□ -1.62
CAPN3P20807 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.93□□□□□ -1.62
CAPN3P20807 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CAPN3P20807 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.93□□□□□ -1.62
CAPN3P20807 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.93□□□□□ -1.62
CAPN3P20807 AC116553.2-201ENST00000564203 463 ntBASIC4.93□□□□□ -1.62
CAPN3P20807 AC090666.1-201ENST00000578241 445 ntBASIC4.93□□□□□ -1.62
CAPN3P20807 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.93□□□□□ -1.62
CAPN3P20807 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.93□□□□□ -1.62
CAPN3P20807 AC005377.1-201ENST00000605126 456 ntBASIC4.93□□□□□ -1.62
CAPN3P20807 AC097504.2-201ENST00000608088 454 ntBASIC4.93□□□□□ -1.62
CAPN3P20807 AL136370.1-201ENST00000608166 691 ntBASIC4.93□□□□□ -1.62
CAPN3P20807 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.93□□□□□ -1.62
CAPN3P20807 AC011447.7-201ENST00000624228 1590 ntBASIC4.93□□□□□ -1.62
CAPN3P20807 AC103798.2-201ENST00000624292 632 ntBASIC4.93□□□□□ -1.62
CAPN3P20807 AC013437.2-201ENST00000639587 677 ntBASIC4.93□□□□□ -1.62
CAPN3P20807 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
CAPN3P20807 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CAPN3P20807 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CAPN3P20807 HSPD1P14-201ENST00000432666 1618 ntBASIC4.93□□□□□ -1.62
CAPN3P20807 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CAPN3P20807 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CAPN3P20807 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.92□□□□□ -1.62
CAPN3P20807 AL136964.1-201ENST00000622038 2990 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CAPN3P20807 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CAPN3P20807 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.92□□□□□ -1.62
CAPN3P20807 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CAPN3P20807 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CAPN3P20807 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CAPN3P20807 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CAPN3P20807 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CAPN3P20807 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CAPN3P20807 AC016716.1-201ENST00000265882 708 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CAPN3P20807 RPL23P2-201ENST00000320371 421 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 RNA5SP335-201ENST00000363817 110 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CAPN3P20807 MIR141-201ENST00000384975 95 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 AC013442.1-201ENST00000397347 228 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CAPN3P20807 AC096533.1-201ENST00000411645 353 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 AC092638.1-201ENST00000411966 1275 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 AC016397.1-201ENST00000412463 242 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 AL450992.3-201ENST00000413192 568 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 AC004448.2-201ENST00000422360 586 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 AC245028.1-201ENST00000423259 256 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 CYCSP6-201ENST00000434498 302 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 SDR42E1P3-201ENST00000438345 502 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.92□□□□□ -1.62
CAPN3P20807 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.92□□□□□ -1.62
CAPN3P20807 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.92□□□□□ -1.62
CAPN3P20807 RHEBP2-201ENST00000450289 600 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.92□□□□□ -1.62
CAPN3P20807 AL356981.1-201ENST00000454879 684 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 RPL21P71-201ENST00000465598 459 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 SNX5P1-201ENST00000505757 1041 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 HMGB3P16-201ENST00000508037 287 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 AC104417.1-201ENST00000523974 751 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CAPN3P20807 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.92□□□□□ -1.62
CAPN3P20807 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.92□□□□□ -1.62
CAPN3P20807 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CAPN3P20807 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.92□□□□□ -1.62
CAPN3P20807 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.92□□□□□ -1.62
CAPN3P20807 MIR4436B2-201ENST00000581415 91 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 MIR4697-201ENST00000582977 78 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 MIR4436B1-201ENST00000583272 91 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.92□□□□□ -1.62
CAPN3P20807 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.92□□□□□ -1.62
CAPN3P20807 AC005084.1-201ENST00000605160 304 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.92□□□□□ -1.62
CAPN3P20807 AP005432.2-201ENST00000608162 586 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 AC105227.2-201ENST00000615075 605 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
CAPN3P20807 AL596275.2-204ENST00000641628 552 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 AL596275.2-206ENST00000641957 626 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 AC092747.4-201ENST00000620519 1861 ntBASIC4.92□□□□□ -1.62
CAPN3P20807 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CAPN3P20807 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CAPN3P20807 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CAPN3P20807 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CAPN3P20807 AL731566.1-201ENST00000620490 1937 ntBASIC4.91□□□□□ -1.62
CAPN3P20807 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CAPN3P20807 MTND5P28-201ENST00000438005 1594 ntBASIC4.91□□□□□ -1.62
CAPN3P20807 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
CAPN3P20807 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CAPN3P20807 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms