Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RWDD4P1-201ENST00000488019 565 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 RPS4XP18-201ENST00000495480 763 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 OR5H4P-201ENST00000510851 923 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AC007016.1-201ENST00000512110 244 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AC025918.2-201ENST00000558683 763 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AC233702.9-201ENST00000581528 203 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AC209154.1-201ENST00000582156 337 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AC067852.4-201ENST00000590314 478 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AC073091.2-201ENST00000603205 907 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 SNORD91B-202ENST00000608459 222 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 MIR6820-201ENST00000611508 62 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 LINC00901.1-201ENST00000617252 152 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 KARSP3-201ENST00000571212 1504 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AL672167.1-205ENST00000641112 3080 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AC108751.5-201ENST00000492880 1336 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AC108467.2-201ENST00000617640 1597 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AL391684.1-202ENST00000641293 1636 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 HSPA8P19-201ENST00000505359 1517 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AL589826.1-201ENST00000340697 249 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 CYB5AP4-201ENST00000396692 399 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 VDAC1P9-201ENST00000412766 841 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AL450992.3-201ENST00000413192 568 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AC004022.2-201ENST00000413824 193 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AL359265.2-201ENST00000434367 631 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AC105402.2-201ENST00000438503 358 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 ARL5AP2-201ENST00000444698 533 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 RPS29P22-201ENST00000472363 168 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 MTND4LP2-201ENST00000502312 285 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AC113430.1-201ENST00000506872 718 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AL731537.2-201ENST00000561565 951 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AC090751.1-201ENST00000566966 267 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AC091178.1-203ENST00000584586 279 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AC023762.1-201ENST00000603280 584 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 OR4H6P-202ENST00000603819 340 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AL450270.1-201ENST00000606160 391 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AC004232.3-201ENST00000622977 525 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 AC009452.1-201ENST00000640823 606 ntBASIC4.64□□□□□ -1.67
HLA-DPA1P20036 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPA1P20036 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 AC006971.1-201ENST00000407916 4486 ntBASIC4.63□□□□□ -1.67
HLA-DPA1P20036 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 MTATP6P31-201ENST00000406985 692 ntBASIC4.63□□□□□ -1.67
HLA-DPA1P20036 RN7SKP97-201ENST00000410966 333 ntBASIC4.63□□□□□ -1.67
HLA-DPA1P20036 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 GAPDHP49-201ENST00000421421 961 ntBASIC4.63□□□□□ -1.67
HLA-DPA1P20036 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 RPL36AP15-201ENST00000444514 266 ntBASIC4.63□□□□□ -1.67
HLA-DPA1P20036 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 NDUFS5P3-201ENST00000450668 321 ntBASIC4.63□□□□□ -1.67
HLA-DPA1P20036 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DPA1P20036 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 195 ms