Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 Z97055.1-201ENST00000419730 712 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 AC018644.1-201ENST00000429934 551 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGA1P17096 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.14□□□□□ -1.75
HMGA1P17096 EIF2S2P5-201ENST00000457635 968 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 RN7SL585P-201ENST00000470538 280 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 RPS26P28-201ENST00000470806 348 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 AC012123.2-201ENST00000485809 248 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 RN7SL271P-201ENST00000487601 295 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGA1P17096 RN7SKP141-201ENST00000516167 338 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGA1P17096 AC087369.1-201ENST00000520775 996 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGA1P17096 DPRXP4-201ENST00000578053 568 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 AC090312.1-201ENST00000580637 348 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 MIR92B-201ENST00000607575 96 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGA1P17096 AC015922.4-201ENST00000612568 690 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 AL121772.2-201ENST00000614331 297 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGA1P17096 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGA1P17096 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGA1P17096 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.14□□□□□ -1.75
HMGA1P17096 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGA1P17096 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
HMGA1P17096 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMGA1P17096 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HMGA1P17096 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
HMGA1P17096 AC100871.1-201ENST00000507871 1456 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HMGA1P17096 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGA1P17096 SNORA62.3-201ENST00000365110 153 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 RNA5SP171-201ENST00000391071 115 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 PTMAP2-201ENST00000397627 327 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.13□□□□□ -1.75
HMGA1P17096 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGA1P17096 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGA1P17096 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGA1P17096 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.13□□□□□ -1.75
HMGA1P17096 AL035246.1-201ENST00000433554 1255 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 HLA-N-201ENST00000437516 135 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 AC083863.1-201ENST00000438811 231 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.13□□□□□ -1.75
HMGA1P17096 NOTCH2P1-201ENST00000443481 624 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 AL133547.1-201ENST00000448546 220 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGA1P17096 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.13□□□□□ -1.75
HMGA1P17096 NANOGP10-201ENST00000453325 895 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 RPS20P21-201ENST00000466859 343 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 PPIAP15-201ENST00000479662 484 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGA1P17096 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.13□□□□□ -1.75
HMGA1P17096 AC093853.1-201ENST00000515689 483 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.13□□□□□ -1.75
HMGA1P17096 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGA1P17096 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.13□□□□□ -1.75
HMGA1P17096 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGA1P17096 CYCSP30-201ENST00000546447 172 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 CYP4A43P-201ENST00000568156 121 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.13□□□□□ -1.75
HMGA1P17096 AC112230.1-201ENST00000604342 547 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 AC104662.1-201ENST00000604448 511 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 CR392039.5-201ENST00000623201 510 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 AC073530.2-201ENST00000623987 261 ntBASIC4.13□□□□□ -1.75
HMGA1P17096 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.13□□□□□ -1.75
HMGA1P17096 AC021242.1-201ENST00000507315 2035 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGA1P17096 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGA1P17096 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.12□□□□□ -1.75
HMGA1P17096 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.12□□□□□ -1.75
HMGA1P17096 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HMGA1P17096 U8.11-201ENST00000384699 133 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 U8.12-201ENST00000384701 133 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 AL590704.1-201ENST00000402856 794 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 RAB9AP3-201ENST00000412737 573 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGA1P17096 HIGD1AP4-201ENST00000430194 280 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 PTMAP3-201ENST00000447474 330 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 RAB9AP1-201ENST00000449393 573 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGA1P17096 U8.18-201ENST00000459285 133 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 PPBPP1-201ENST00000510807 373 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 AC006499.6-201ENST00000511169 607 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 SCARNA14-201ENST00000516903 136 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGA1P17096 OR5D2P-201ENST00000524390 911 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.12□□□□□ -1.75
HMGA1P17096 HNRNPCP4-201ENST00000571636 900 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGA1P17096 AC095038.2-201ENST00000621464 1070 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 AL596275.2-204ENST00000641628 552 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 AL596275.2-206ENST00000641957 626 ntBASIC4.12□□□□□ -1.75
HMGA1P17096 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGA1P17096 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGA1P17096 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HMGA1P17096 AP002001.2-201ENST00000529025 1469 ntBASIC4.11□□□□□ -1.75
HMGA1P17096 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HMGA1P17096 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms