Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.03□□□□□ -1.6
TOP1P11387 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TOP1P11387 AC090948.2-201ENST00000607363 564 ntBASIC5.03□□□□□ -1.6
TOP1P11387 FAM27D1-201ENST00000612308 341 ntBASIC5.03□□□□□ -1.6
TOP1P11387 AL138721.1-201ENST00000616756 179 ntBASIC5.03□□□□□ -1.6
TOP1P11387 AL731566.2-201ENST00000618971 317 ntBASIC5.03□□□□□ -1.6
TOP1P11387 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.03□□□□□ -1.6
TOP1P11387 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.03□□□□□ -1.6
TOP1P11387 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
TOP1P11387 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.03□□□□□ -1.6
TOP1P11387 AC005261.4-201ENST00000600047 1385 ntBASIC5.03□□□□□ -1.6
TOP1P11387 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.02□□□□□ -1.61
TOP1P11387 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.02□□□□□ -1.61
TOP1P11387 AC026951.1-201ENST00000559530 2459 ntBASIC5.02□□□□□ -1.61
TOP1P11387 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TOP1P11387 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TOP1P11387 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TOP1P11387 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TOP1P11387 AC067945.1-201ENST00000342609 618 ntBASIC5.02□□□□□ -1.61
TOP1P11387 VN1R8P-201ENST00000407739 893 ntBASIC5.02□□□□□ -1.61
TOP1P11387 AL035696.2-201ENST00000407941 709 ntBASIC5.02□□□□□ -1.61
TOP1P11387 RNA5SP36-201ENST00000410197 133 ntBASIC5.02□□□□□ -1.61
TOP1P11387 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.02□□□□□ -1.61
TOP1P11387 UBTFL3-201ENST00000418934 1024 ntBASIC5.02□□□□□ -1.61
TOP1P11387 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.02□□□□□ -1.61
TOP1P11387 DYNLL1P7-201ENST00000429273 258 ntBASIC5.02□□□□□ -1.61
TOP1P11387 SKP1P3-201ENST00000429280 487 ntBASIC5.02□□□□□ -1.61
TOP1P11387 CEACAMP1-201ENST00000434624 1035 ntBASIC5.02□□□□□ -1.61
TOP1P11387 RPS20P1-201ENST00000434853 354 ntBASIC5.02□□□□□ -1.61
TOP1P11387 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.02□□□□□ -1.61
TOP1P11387 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.02□□□□□ -1.61
TOP1P11387 RPL23AP81-201ENST00000455252 467 ntBASIC5.02□□□□□ -1.61
TOP1P11387 UBTFL6-201ENST00000477929 1024 ntBASIC5.02□□□□□ -1.61
TOP1P11387 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.02□□□□□ -1.61
TOP1P11387 IGBP1P5-201ENST00000507524 1000 ntBASIC5.02□□□□□ -1.61
TOP1P11387 RNU6-319P-201ENST00000516025 108 ntBASIC5.02□□□□□ -1.61
TOP1P11387 SNORD116-30-201ENST00000516468 85 ntBASIC5.02□□□□□ -1.61
TOP1P11387 RNA5SP519-201ENST00000516480 119 ntBASIC5.02□□□□□ -1.61
TOP1P11387 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.02□□□□□ -1.61
TOP1P11387 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TOP1P11387 TVP23BP1-201ENST00000557500 617 ntBASIC5.02□□□□□ -1.61
TOP1P11387 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.02□□□□□ -1.61
TOP1P11387 AC010615.3-201ENST00000597319 394 ntBASIC5.02□□□□□ -1.61
TOP1P11387 AC123786.2-201ENST00000603459 275 ntBASIC5.02□□□□□ -1.61
TOP1P11387 AL161729.3-201ENST00000603533 673 ntBASIC5.02□□□□□ -1.61
TOP1P11387 AC116447.1-201ENST00000613153 453 ntBASIC5.02□□□□□ -1.61
TOP1P11387 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TOP1P11387 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TOP1P11387 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.02□□□□□ -1.61
TOP1P11387 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.02□□□□□ -1.61
TOP1P11387 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
TOP1P11387 LARP1BP1-201ENST00000506036 1359 ntBASIC5.02□□□□□ -1.61
TOP1P11387 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TOP1P11387 AL592182.3-201ENST00000642132 3304 ntBASIC5.02□□□□□ -1.61
TOP1P11387 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TOP1P11387 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.01□□□□□ -1.61
TOP1P11387 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TOP1P11387 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TOP1P11387 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
TOP1P11387 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
TOP1P11387 AC011155.1-201ENST00000316512 456 ntBASIC5.01□□□□□ -1.61
TOP1P11387 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
TOP1P11387 AL034403.1-201ENST00000399414 885 ntBASIC5.01□□□□□ -1.61
TOP1P11387 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.01□□□□□ -1.61
TOP1P11387 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.01□□□□□ -1.61
TOP1P11387 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TOP1P11387 EIF2S2P3-201ENST00000428356 999 ntBASIC5.01□□□□□ -1.61
TOP1P11387 RPL12P46-201ENST00000436610 195 ntBASIC5.01□□□□□ -1.61
TOP1P11387 ELOCP10-201ENST00000440624 327 ntBASIC5.01□□□□□ -1.61
TOP1P11387 AC103987.1-201ENST00000473394 348 ntBASIC5.01□□□□□ -1.61
TOP1P11387 LARP7P4-201ENST00000481075 878 ntBASIC5.01□□□□□ -1.61
TOP1P11387 AC093267.1-201ENST00000489176 961 ntBASIC5.01□□□□□ -1.61
TOP1P11387 AC113430.1-201ENST00000506872 718 ntBASIC5.01□□□□□ -1.61
TOP1P11387 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.01□□□□□ -1.61
TOP1P11387 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TOP1P11387 AC108043.1-201ENST00000512696 574 ntBASIC5.01□□□□□ -1.61
TOP1P11387 MRPL49P2-201ENST00000521066 465 ntBASIC5.01□□□□□ -1.61
TOP1P11387 PDCD5P1-201ENST00000543528 309 ntBASIC5.01□□□□□ -1.61
TOP1P11387 AL109766.1-201ENST00000555080 552 ntBASIC5.01□□□□□ -1.61
TOP1P11387 AC025884.1-201ENST00000556034 378 ntBASIC5.01□□□□□ -1.61
TOP1P11387 AC018552.3-201ENST00000567416 561 ntBASIC5.01□□□□□ -1.61
TOP1P11387 ADAM3B-201ENST00000569937 840 ntBASIC5.01□□□□□ -1.61
TOP1P11387 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.01□□□□□ -1.61
TOP1P11387 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.01□□□□□ -1.61
TOP1P11387 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.01□□□□□ -1.61
TOP1P11387 ELOCP34-201ENST00000604436 327 ntBASIC5.01□□□□□ -1.61
TOP1P11387 AC016717.3-201ENST00000624730 554 ntBASIC5.01□□□□□ -1.61
TOP1P11387 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TOP1P11387 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TOP1P11387 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TOP1P11387 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TOP1P11387 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5□□□□□ -1.61
TOP1P11387 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5□□□□□ -1.61
TOP1P11387 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5□□□□□ -1.61
TOP1P11387 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
TOP1P11387 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
TOP1P11387 AC009229.4-201ENST00000623854 1947 ntBASIC5□□□□□ -1.61
TOP1P11387 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
TOP1P11387 SNORA70C-201ENST00000384538 135 ntBASIC5□□□□□ -1.61
TOP1P11387 SNORD66.1-201ENST00000391230 76 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms