Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 NRBF2P2-201ENST00000413087 861 ntBASIC4.44□□□□□ -1.7
APOEP02649 RPS23P10-201ENST00000416185 486 ntBASIC4.44□□□□□ -1.7
APOEP02649 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
APOEP02649 RBMY1KP-201ENST00000423480 476 ntBASIC4.44□□□□□ -1.7
APOEP02649 RPL23AP38-201ENST00000423801 469 ntBASIC4.44□□□□□ -1.7
APOEP02649 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.44□□□□□ -1.7
APOEP02649 NDUFS5P3-201ENST00000450668 321 ntBASIC4.44□□□□□ -1.7
APOEP02649 RN7SL385P-201ENST00000468873 276 ntBASIC4.44□□□□□ -1.7
APOEP02649 AC041039.1-201ENST00000485656 536 ntBASIC4.44□□□□□ -1.7
APOEP02649 RN7SL691P-201ENST00000494487 301 ntBASIC4.44□□□□□ -1.7
APOEP02649 KCTD9P2-201ENST00000512203 1013 ntBASIC4.44□□□□□ -1.7
APOEP02649 RNA5SP49-201ENST00000516450 115 ntBASIC4.44□□□□□ -1.7
APOEP02649 RNA5SP519-201ENST00000516480 119 ntBASIC4.44□□□□□ -1.7
APOEP02649 AC006064.5-201ENST00000541782 248 ntBASIC4.44□□□□□ -1.7
APOEP02649 DUX4L52-201ENST00000549363 777 ntBASIC4.44□□□□□ -1.7
APOEP02649 AL109766.1-201ENST00000555080 552 ntBASIC4.44□□□□□ -1.7
APOEP02649 MIR3138-201ENST00000585238 82 ntBASIC4.44□□□□□ -1.7
APOEP02649 AL139395.1-201ENST00000603662 160 ntBASIC4.44□□□□□ -1.7
APOEP02649 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.44□□□□□ -1.7
APOEP02649 MIR6716-201ENST00000613413 80 ntBASIC4.44□□□□□ -1.7
APOEP02649 AC083809.1-201ENST00000615051 472 ntBASIC4.44□□□□□ -1.7
APOEP02649 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.44□□□□□ -1.7
APOEP02649 AL445363.3-201ENST00000623080 671 ntBASIC4.44□□□□□ -1.7
APOEP02649 AC019278.1-201ENST00000623516 479 ntBASIC4.44□□□□□ -1.7
APOEP02649 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.44□□□□□ -1.7
APOEP02649 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
APOEP02649 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
APOEP02649 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
APOEP02649 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
APOEP02649 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
APOEP02649 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
APOEP02649 AC005261.4-201ENST00000600047 1385 ntBASIC4.43□□□□□ -1.7
APOEP02649 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.43□□□□□ -1.7
APOEP02649 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
APOEP02649 SNORD66.1-201ENST00000391230 76 ntBASIC4.43□□□□□ -1.7
APOEP02649 MIR1179-201ENST00000408703 91 ntBASIC4.43□□□□□ -1.7
APOEP02649 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.43□□□□□ -1.7
APOEP02649 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
APOEP02649 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
APOEP02649 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.43□□□□□ -1.7
APOEP02649 RN7SKP235-201ENST00000410662 305 ntBASIC4.43□□□□□ -1.7
APOEP02649 AL161631.1-201ENST00000417933 486 ntBASIC4.43□□□□□ -1.7
APOEP02649 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.43□□□□□ -1.7
APOEP02649 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.43□□□□□ -1.7
APOEP02649 RPL23AP46-201ENST00000438548 490 ntBASIC4.43□□□□□ -1.7
APOEP02649 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.43□□□□□ -1.7
APOEP02649 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.43□□□□□ -1.7
APOEP02649 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.43□□□□□ -1.7
APOEP02649 AC010618.1-201ENST00000469924 477 ntBASIC4.43□□□□□ -1.7
APOEP02649 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.43□□□□□ -1.7
APOEP02649 AC105137.1-201ENST00000484355 562 ntBASIC4.43□□□□□ -1.7
APOEP02649 AC091167.1-201ENST00000492017 396 ntBASIC4.43□□□□□ -1.7
APOEP02649 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.43□□□□□ -1.7
APOEP02649 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.43□□□□□ -1.7
APOEP02649 AC002456.2-201ENST00000509356 380 ntBASIC4.43□□□□□ -1.7
APOEP02649 RNA5SP73-201ENST00000516744 108 ntBASIC4.43□□□□□ -1.7
APOEP02649 IFITM8P-201ENST00000522529 394 ntBASIC4.43□□□□□ -1.7
APOEP02649 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
APOEP02649 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.43□□□□□ -1.7
APOEP02649 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.43□□□□□ -1.7
APOEP02649 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
APOEP02649 AC105105.5-201ENST00000622635 1294 ntBASIC4.43□□□□□ -1.7
APOEP02649 RLIMP2-201ENST00000427891 1563 ntBASIC4.43□□□□□ -1.7
APOEP02649 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.43□□□□□ -1.7
APOEP02649 Z73965.1-201ENST00000623412 2297 ntBASIC4.43□□□□□ -1.7
APOEP02649 AP000756.2-201ENST00000624168 2567 ntBASIC4.43□□□□□ -1.7
APOEP02649 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.43□□□□□ -1.7
APOEP02649 AC009951.1-201ENST00000623674 2614 ntBASIC4.42□□□□□ -1.7
APOEP02649 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.42□□□□□ -1.7
APOEP02649 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
APOEP02649 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
APOEP02649 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
APOEP02649 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.42□□□□□ -1.7
APOEP02649 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.42□□□□□ -1.7
APOEP02649 RPS6P12-201ENST00000432491 726 ntBASIC4.42□□□□□ -1.7
APOEP02649 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.42□□□□□ -1.7
APOEP02649 NUTF2P3-201ENST00000448540 384 ntBASIC4.42□□□□□ -1.7
APOEP02649 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.42□□□□□ -1.7
APOEP02649 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.42□□□□□ -1.7
APOEP02649 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.42□□□□□ -1.7
APOEP02649 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.42□□□□□ -1.7
APOEP02649 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.42□□□□□ -1.7
APOEP02649 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.42□□□□□ -1.7
APOEP02649 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.42□□□□□ -1.7
APOEP02649 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
APOEP02649 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.42□□□□□ -1.7
APOEP02649 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.42□□□□□ -1.7
APOEP02649 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.42□□□□□ -1.7
APOEP02649 AC069366.1-201ENST00000583159 838 ntBASIC4.42□□□□□ -1.7
APOEP02649 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
APOEP02649 AC004825.2-201ENST00000616634 455 ntBASIC4.42□□□□□ -1.7
APOEP02649 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.42□□□□□ -1.7
APOEP02649 AL445567.2-201ENST00000618935 498 ntBASIC4.42□□□□□ -1.7
APOEP02649 MIR6810-201ENST00000622701 70 ntBASIC4.42□□□□□ -1.7
APOEP02649 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
APOEP02649 IQCB2P-201ENST00000401788 1633 ntBASIC4.42□□□□□ -1.7
APOEP02649 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
APOEP02649 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
APOEP02649 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
APOEP02649 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms