Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SGCEO43556 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.88□□□□□ -1.79
SGCEO43556 MARK2P15-201ENST00000432204 2186 ntBASIC3.88□□□□□ -1.79
SGCEO43556 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SGCEO43556 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.88□□□□□ -1.79
SGCEO43556 AC079741.1-201ENST00000321498 212 ntBASIC3.88□□□□□ -1.79
SGCEO43556 RNU6-1251P-201ENST00000364502 107 ntBASIC3.88□□□□□ -1.79
SGCEO43556 MIR92A2-201ENST00000385299 75 ntBASIC3.88□□□□□ -1.79
SGCEO43556 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SGCEO43556 SNORD65-201ENST00000391079 73 ntBASIC3.88□□□□□ -1.79
SGCEO43556 RN7SKP222-201ENST00000410651 315 ntBASIC3.88□□□□□ -1.79
SGCEO43556 SNORA74C-2-201ENST00000411179 201 ntBASIC3.88□□□□□ -1.79
SGCEO43556 AL590806.1-201ENST00000415818 853 ntBASIC3.88□□□□□ -1.79
SGCEO43556 AL590139.1-201ENST00000416267 400 ntBASIC3.88□□□□□ -1.79
SGCEO43556 RPL7AP25-201ENST00000423357 805 ntBASIC3.88□□□□□ -1.79
SGCEO43556 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.88□□□□□ -1.79
SGCEO43556 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.88□□□□□ -1.79
SGCEO43556 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.88□□□□□ -1.79
SGCEO43556 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.88□□□□□ -1.79
SGCEO43556 RPL7P31-201ENST00000450192 724 ntBASIC3.88□□□□□ -1.79
SGCEO43556 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.88□□□□□ -1.79
SGCEO43556 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.88□□□□□ -1.79
SGCEO43556 PSMC1P13-201ENST00000458195 985 ntBASIC3.88□□□□□ -1.79
SGCEO43556 S100A11P1-201ENST00000477525 312 ntBASIC3.88□□□□□ -1.79
SGCEO43556 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.88□□□□□ -1.79
SGCEO43556 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.88□□□□□ -1.79
SGCEO43556 IGKV2D-23-201ENST00000518179 286 ntBASIC3.88□□□□□ -1.79
SGCEO43556 IGLV3-26-201ENST00000520756 302 ntBASIC3.88□□□□□ -1.79
SGCEO43556 AP000827.1-201ENST00000527814 258 ntBASIC3.88□□□□□ -1.79
SGCEO43556 AC100770.1-201ENST00000532310 322 ntBASIC3.88□□□□□ -1.79
SGCEO43556 AC063949.1-201ENST00000552900 865 ntBASIC3.88□□□□□ -1.79
SGCEO43556 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.88□□□□□ -1.79
SGCEO43556 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.88□□□□□ -1.79
SGCEO43556 AC110743.1-201ENST00000584870 478 ntBASIC3.88□□□□□ -1.79
SGCEO43556 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.88□□□□□ -1.79
SGCEO43556 AL160290.3-201ENST00000604869 165 ntBASIC3.88□□□□□ -1.79
SGCEO43556 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.88□□□□□ -1.79
SGCEO43556 OR6R2P-201ENST00000609216 300 ntBASIC3.88□□□□□ -1.79
SGCEO43556 AL138721.1-201ENST00000616756 179 ntBASIC3.88□□□□□ -1.79
SGCEO43556 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.88□□□□□ -1.79
SGCEO43556 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.88□□□□□ -1.79
SGCEO43556 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SGCEO43556 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SGCEO43556 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SGCEO43556 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
SGCEO43556 AL592148.3-201ENST00000608771 2646 ntBASIC3.88□□□□□ -1.79
SGCEO43556 AC009951.1-201ENST00000623674 2614 ntBASIC3.88□□□□□ -1.79
SGCEO43556 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.87□□□□□ -1.79
SGCEO43556 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.87□□□□□ -1.79
SGCEO43556 AP001486.2-201ENST00000561652 5113 ntBASIC3.87□□□□□ -1.79
SGCEO43556 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
SGCEO43556 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SGCEO43556 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SGCEO43556 RNVU1-6-201ENST00000364688 164 ntBASIC3.87□□□□□ -1.79
SGCEO43556 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SGCEO43556 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SGCEO43556 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.87□□□□□ -1.79
SGCEO43556 RPS3AP23-201ENST00000401762 784 ntBASIC3.87□□□□□ -1.79
SGCEO43556 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.87□□□□□ -1.79
SGCEO43556 SNRPFP1-201ENST00000414761 252 ntBASIC3.87□□□□□ -1.79
SGCEO43556 AC119751.6-201ENST00000416712 186 ntBASIC3.87□□□□□ -1.79
SGCEO43556 AC006065.1-201ENST00000422539 802 ntBASIC3.87□□□□□ -1.79
SGCEO43556 MTND2P11-201ENST00000423638 648 ntBASIC3.87□□□□□ -1.79
SGCEO43556 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.87□□□□□ -1.79
SGCEO43556 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.87□□□□□ -1.79
SGCEO43556 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.87□□□□□ -1.79
SGCEO43556 MAPRE1P3-201ENST00000435438 796 ntBASIC3.87□□□□□ -1.79
SGCEO43556 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.87□□□□□ -1.79
SGCEO43556 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.87□□□□□ -1.79
SGCEO43556 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.87□□□□□ -1.79
SGCEO43556 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.87□□□□□ -1.79
SGCEO43556 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.87□□□□□ -1.79
SGCEO43556 RPL23AP72-201ENST00000492447 435 ntBASIC3.87□□□□□ -1.79
SGCEO43556 RN7SL812P-201ENST00000493791 279 ntBASIC3.87□□□□□ -1.79
SGCEO43556 AC008897.1-201ENST00000494006 347 ntBASIC3.87□□□□□ -1.79
SGCEO43556 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.87□□□□□ -1.79
SGCEO43556 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.87□□□□□ -1.79
SGCEO43556 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.87□□□□□ -1.79
SGCEO43556 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.87□□□□□ -1.79
SGCEO43556 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
SGCEO43556 AC015911.5-201ENST00000587076 451 ntBASIC3.87□□□□□ -1.79
SGCEO43556 AP001160.4-201ENST00000596971 382 ntBASIC3.87□□□□□ -1.79
SGCEO43556 AC008782.1-201ENST00000603386 430 ntBASIC3.87□□□□□ -1.79
SGCEO43556 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.87□□□□□ -1.79
SGCEO43556 AL035461.2-201ENST00000619201 524 ntBASIC3.87□□□□□ -1.79
SGCEO43556 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.87□□□□□ -1.79
SGCEO43556 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SGCEO43556 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SGCEO43556 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.87□□□□□ -1.79
SGCEO43556 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.87□□□□□ -1.79
SGCEO43556 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SGCEO43556 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SGCEO43556 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SGCEO43556 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SGCEO43556 OR56B2P-202ENST00000641377 2453 ntBASIC3.86□□□□□ -1.79
SGCEO43556 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SGCEO43556 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SGCEO43556 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SGCEO43556 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SGCEO43556 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms