Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 AC079171.1-201ENST00000568788 914 ntBASIC5.18□□□□□ -1.58
PROM1O43490 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.18□□□□□ -1.58
PROM1O43490 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 AP000811.1-201ENST00000603803 651 ntBASIC5.18□□□□□ -1.58
PROM1O43490 AC099676.1-201ENST00000608886 657 ntBASIC5.18□□□□□ -1.58
PROM1O43490 AC104073.3-201ENST00000610942 955 ntBASIC5.18□□□□□ -1.58
PROM1O43490 AL139418.1-201ENST00000613613 177 ntBASIC5.18□□□□□ -1.58
PROM1O43490 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.18□□□□□ -1.58
PROM1O43490 uc_338.7-201ENST00000621834 124 ntBASIC5.18□□□□□ -1.58
PROM1O43490 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 FP325313.1-201ENST00000638228 703 ntBASIC5.18□□□□□ -1.58
PROM1O43490 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PROM1O43490 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
PROM1O43490 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PROM1O43490 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PROM1O43490 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PROM1O43490 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PROM1O43490 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.18□□□□□ -1.58
PROM1O43490 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PROM1O43490 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PROM1O43490 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PROM1O43490 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
PROM1O43490 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.17□□□□□ -1.58
PROM1O43490 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PROM1O43490 AC087359.1-201ENST00000508335 1740 ntBASIC5.17□□□□□ -1.58
PROM1O43490 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PROM1O43490 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.17□□□□□ -1.58
PROM1O43490 ZNF733P-202ENST00000444809 1573 ntBASIC5.17□□□□□ -1.58
PROM1O43490 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.17□□□□□ -1.58
PROM1O43490 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PROM1O43490 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PROM1O43490 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PROM1O43490 METTL21EP-201ENST00000298105 713 ntBASIC5.17□□□□□ -1.58
PROM1O43490 ENSAP3-201ENST00000312710 333 ntBASIC5.17□□□□□ -1.58
PROM1O43490 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PROM1O43490 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.17□□□□□ -1.58
PROM1O43490 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PROM1O43490 AC105402.1-201ENST00000413336 545 ntBASIC5.17□□□□□ -1.58
PROM1O43490 LINC01881-201ENST00000416103 412 ntBASIC5.17□□□□□ -1.58
PROM1O43490 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.17□□□□□ -1.58
PROM1O43490 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.17□□□□□ -1.58
PROM1O43490 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.17□□□□□ -1.58
PROM1O43490 GTF2IP23-201ENST00000423746 351 ntBASIC5.17□□□□□ -1.58
PROM1O43490 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.17□□□□□ -1.58
PROM1O43490 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PROM1O43490 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.17□□□□□ -1.58
PROM1O43490 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.17□□□□□ -1.58
PROM1O43490 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.17□□□□□ -1.58
PROM1O43490 AL390119.1-201ENST00000440329 312 ntBASIC5.17□□□□□ -1.58
PROM1O43490 RPL23AP76-201ENST00000441860 458 ntBASIC5.17□□□□□ -1.58
PROM1O43490 TCEA1P3-201ENST00000443005 880 ntBASIC5.17□□□□□ -1.58
PROM1O43490 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.17□□□□□ -1.58
PROM1O43490 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.17□□□□□ -1.58
PROM1O43490 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PROM1O43490 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.17□□□□□ -1.58
PROM1O43490 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.17□□□□□ -1.58
PROM1O43490 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.17□□□□□ -1.58
PROM1O43490 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.17□□□□□ -1.58
PROM1O43490 PSMC1P13-201ENST00000458195 985 ntBASIC5.17□□□□□ -1.58
PROM1O43490 GAPDHP36-201ENST00000480688 918 ntBASIC5.17□□□□□ -1.58
PROM1O43490 AC068724.1-201ENST00000487100 792 ntBASIC5.17□□□□□ -1.58
PROM1O43490 AC108693.1-201ENST00000496068 432 ntBASIC5.17□□□□□ -1.58
PROM1O43490 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.17□□□□□ -1.58
PROM1O43490 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.17□□□□□ -1.58
PROM1O43490 AC008885.2-201ENST00000509506 930 ntBASIC5.17□□□□□ -1.58
PROM1O43490 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.17□□□□□ -1.58
PROM1O43490 AC023632.1-201ENST00000518463 375 ntBASIC5.17□□□□□ -1.58
PROM1O43490 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.17□□□□□ -1.58
PROM1O43490 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.17□□□□□ -1.58
PROM1O43490 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.17□□□□□ -1.58
PROM1O43490 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.17□□□□□ -1.58
PROM1O43490 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.17□□□□□ -1.58
PROM1O43490 MIR3912-201ENST00000577566 105 ntBASIC5.17□□□□□ -1.58
PROM1O43490 MIR1269B-201ENST00000580405 75 ntBASIC5.17□□□□□ -1.58
PROM1O43490 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.17□□□□□ -1.58
PROM1O43490 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.17□□□□□ -1.58
PROM1O43490 VN1R82P-201ENST00000601481 356 ntBASIC5.17□□□□□ -1.58
PROM1O43490 AF131215.7-201ENST00000602443 707 ntBASIC5.17□□□□□ -1.58
PROM1O43490 AC004987.4-201ENST00000603383 338 ntBASIC5.17□□□□□ -1.58
PROM1O43490 AL158063.1-201ENST00000615349 536 ntBASIC5.17□□□□□ -1.58
PROM1O43490 AC006338.2-201ENST00000616864 791 ntBASIC5.17□□□□□ -1.58
PROM1O43490 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.17□□□□□ -1.58
PROM1O43490 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.17□□□□□ -1.58
PROM1O43490 AC087821.2-201ENST00000637086 450 ntBASIC5.17□□□□□ -1.58
PROM1O43490 MFSD8-245ENST00000641743 948 ntBASIC5.17□□□□□ -1.58
PROM1O43490 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PROM1O43490 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.17□□□□□ -1.58
PROM1O43490 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.17□□□□□ -1.58
PROM1O43490 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PROM1O43490 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PROM1O43490 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.16□□□□□ -1.58
PROM1O43490 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms