Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1AO00322 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
UPK1AO00322 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1AO00322 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1AO00322 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
UPK1AO00322 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1AO00322 RNU1-32P-201ENST00000363937 159 ntBASIC3.93□□□□□ -1.78
UPK1AO00322 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
UPK1AO00322 AL592293.2-201ENST00000422292 996 ntBASIC3.93□□□□□ -1.78
UPK1AO00322 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1AO00322 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1AO00322 AL356535.1-201ENST00000440335 398 ntBASIC3.93□□□□□ -1.78
UPK1AO00322 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.93□□□□□ -1.78
UPK1AO00322 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.93□□□□□ -1.78
UPK1AO00322 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.93□□□□□ -1.78
UPK1AO00322 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.93□□□□□ -1.78
UPK1AO00322 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.93□□□□□ -1.78
UPK1AO00322 AC009963.2-201ENST00000453431 138 ntBASIC3.93□□□□□ -1.78
UPK1AO00322 RPS20P4-201ENST00000461659 355 ntBASIC3.93□□□□□ -1.78
UPK1AO00322 RN7SL303P-201ENST00000469773 251 ntBASIC3.93□□□□□ -1.78
UPK1AO00322 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.93□□□□□ -1.78
UPK1AO00322 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.93□□□□□ -1.78
UPK1AO00322 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1AO00322 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.93□□□□□ -1.78
UPK1AO00322 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.93□□□□□ -1.78
UPK1AO00322 VWA8P1-201ENST00000510889 176 ntBASIC3.93□□□□□ -1.78
UPK1AO00322 KCTD9P2-201ENST00000512203 1013 ntBASIC3.93□□□□□ -1.78
UPK1AO00322 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.93□□□□□ -1.78
UPK1AO00322 RNA5SP228-201ENST00000516232 133 ntBASIC3.93□□□□□ -1.78
UPK1AO00322 IGKV2-38-201ENST00000517443 247 ntBASIC3.93□□□□□ -1.78
UPK1AO00322 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.93□□□□□ -1.78
UPK1AO00322 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.93□□□□□ -1.78
UPK1AO00322 PSMB7P1-201ENST00000556349 514 ntBASIC3.93□□□□□ -1.78
UPK1AO00322 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.93□□□□□ -1.78
UPK1AO00322 MTND2P13-201ENST00000577438 1039 ntBASIC3.93□□□□□ -1.78
UPK1AO00322 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.93□□□□□ -1.78
UPK1AO00322 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.93□□□□□ -1.78
UPK1AO00322 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.93□□□□□ -1.78
UPK1AO00322 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.93□□□□□ -1.78
UPK1AO00322 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.93□□□□□ -1.78
UPK1AO00322 AL356121.2-201ENST00000624715 780 ntBASIC3.93□□□□□ -1.78
UPK1AO00322 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1AO00322 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1AO00322 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
UPK1AO00322 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
UPK1AO00322 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1AO00322 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1AO00322 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
UPK1AO00322 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1AO00322 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.93□□□□□ -1.78
UPK1AO00322 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1AO00322 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
UPK1AO00322 AC012020.1-201ENST00000624541 1728 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
UPK1AO00322 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.92□□□□□ -1.78
UPK1AO00322 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UPK1AO00322 AC027290.2-201ENST00000623210 18662 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.92□□□□□ -1.78
UPK1AO00322 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.92□□□□□ -1.78
UPK1AO00322 Y_RNA.62-201ENST00000362840 99 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 RNU1-89P-201ENST00000384592 164 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
UPK1AO00322 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.92□□□□□ -1.78
UPK1AO00322 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.92□□□□□ -1.78
UPK1AO00322 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UPK1AO00322 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UPK1AO00322 AL590609.2-201ENST00000421430 368 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.92□□□□□ -1.78
UPK1AO00322 ACTR3P2-201ENST00000439585 1257 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UPK1AO00322 EIF2S2P2-201ENST00000447161 982 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UPK1AO00322 MTND4LP12-201ENST00000448237 295 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.92□□□□□ -1.78
UPK1AO00322 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UPK1AO00322 CCDC75P1-201ENST00000469247 791 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 AC041039.1-201ENST00000485656 536 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.92□□□□□ -1.78
UPK1AO00322 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.92□□□□□ -1.78
UPK1AO00322 AL133372.1-201ENST00000493565 745 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.92□□□□□ -1.78
UPK1AO00322 AC113398.2-201ENST00000507630 558 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.92□□□□□ -1.78
UPK1AO00322 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.92□□□□□ -1.78
UPK1AO00322 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.92□□□□□ -1.78
UPK1AO00322 AC063950.1-201ENST00000552036 308 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
UPK1AO00322 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.92□□□□□ -1.78
UPK1AO00322 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.92□□□□□ -1.78
UPK1AO00322 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.92□□□□□ -1.78
UPK1AO00322 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.92□□□□□ -1.78
UPK1AO00322 AC020914.4-201ENST00000597690 277 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 AL161729.3-201ENST00000603533 673 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 AC114781.5-201ENST00000615297 108 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 AC011944.2-201ENST00000624440 683 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.92□□□□□ -1.78
UPK1AO00322 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.92□□□□□ -1.78
UPK1AO00322 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UPK1AO00322 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.92□□□□□ -1.78
UPK1AO00322 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms