Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 RNA5SP317-201ENST00000410176 116 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 RNA5SP104-201ENST00000410989 118 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 RNA5SP311-201ENST00000411290 116 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 RPL21P43-201ENST00000425440 472 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 EEF1A1P1-201ENST00000447052 739 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC104306.1-201ENST00000449702 371 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC041039.1-201ENST00000485656 536 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC139783.2-201ENST00000504847 1145 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL592156.1-201ENST00000508758 304 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 RNA5SP315-201ENST00000516340 116 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 RNA5SP312-201ENST00000517068 116 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC091178.1-203ENST00000584586 279 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC010615.3-201ENST00000597319 394 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC068790.5-201ENST00000602741 355 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL591034.3-201ENST00000605511 685 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC008966.2-201ENST00000606157 453 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC067931.1-201ENST00000624190 671 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 OR2L1P-202ENST00000641567 1023 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC008033.1-201ENST00000216407 1162 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 SNORA37-201ENST00000384504 129 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC025750.1-201ENST00000399891 379 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 SNRPFP1-201ENST00000414761 252 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC108032.1-201ENST00000416706 207 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC062016.2-201ENST00000420950 676 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 EIF1P3-201ENST00000423841 334 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 COX6CP15-201ENST00000426313 211 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 RPL21P91-201ENST00000429231 479 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 NPM1P48-201ENST00000436002 853 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 RN7SL132P-201ENST00000478131 296 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC012158.1-204ENST00000483430 465 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AK4P6-201ENST00000505168 528 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC008958.1-201ENST00000511047 682 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 KCTD9P2-201ENST00000512203 1013 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC090151.1-201ENST00000520784 730 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 MED28P5-201ENST00000528254 438 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 TVP23BP1-201ENST00000557500 617 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL031666.3-201ENST00000609320 1006 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 NF1P10-201ENST00000613227 742 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC074276.2-201ENST00000619891 348 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 LARP1BP1-201ENST00000506036 1359 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 RLIMP2-201ENST00000427891 1563 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 ASNSP1-204ENST00000641977 1664 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL158163.1-201ENST00000603915 1649 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC233968.1-201ENST00000611212 1300 ntBASIC4.21□□□□□ -1.74
TMX2-CTNND1H3BSU7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 SPRR2C-201ENST00000290702 219 ntBASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms