Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RPA2P2-201ENST00000419698 796 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 MTCO2P23-201ENST00000425216 680 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 OR2AH1P-201ENST00000425717 928 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 MTATP6P17-201ENST00000431030 672 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 AC093716.1-201ENST00000435923 377 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 MTCYBP21-201ENST00000443300 1113 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 RPL7P33-201ENST00000444159 742 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 NDUFA12P1-201ENST00000455914 406 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 AC096741.1-201ENST00000472250 846 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SNX9Q9Y5X1 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 KRTAP5-14P-201ENST00000502328 121 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 AC093720.1-201ENST00000505681 714 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 AC069306.1-201ENST00000507006 843 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 MTHFD2P4-201ENST00000515074 1025 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 IGHV3-63-201ENST00000518422 341 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 HAUS1P3-201ENST00000523909 662 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 CIR1P1-201ENST00000524055 1133 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 DERA-209ENST00000532964 854 ntTSL 5 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 MTND1P24-201ENST00000552175 861 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 AL049838.1-201ENST00000563647 981 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 AC234771.5-201ENST00000600161 514 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 AC112503.1-201ENST00000608436 391 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 MIR6748-201ENST00000610433 71 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 AC084824.4-201ENST00000620106 731 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 AP000346.3-201ENST00000622821 210 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 AC097520.1-201ENST00000624435 385 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 U3.53-201ENST00000628922 216 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 OR14L1P-202ENST00000641545 3009 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SNX9Q9Y5X1 ZNF90P1-201ENST00000480493 1951 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 MFSD8-216ENST00000641147 4009 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SNX9Q9Y5X1 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC106754.1-201ENST00000562632 1513 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 RN7SKP224-201ENST00000364140 325 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 RNU6-354P-201ENST00000383862 107 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 SNORA70F-201ENST00000384142 135 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 RNU6-610P-201ENST00000384264 107 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 RPS24P12-201ENST00000402084 394 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 Z98745.1-201ENST00000402553 494 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC114973.1-201ENST00000429057 632 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC006994.1-201ENST00000438212 839 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC104763.1-201ENST00000475274 360 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 PPM1AP1-201ENST00000502740 1135 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 OR5H3P-201ENST00000502817 919 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC021146.7-201ENST00000509604 775 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 RNA5SP303-201ENST00000516192 130 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC004232.3-201ENST00000622977 525 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC093875.1-201ENST00000623688 504 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AC126544.2-201ENST00000625174 749 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms