Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RHBDD3Q9Y3P4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
RHBDD3Q9Y3P4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RHBDD3Q9Y3P4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RHBDD3Q9Y3P4 DCAF13P3-201ENST00000561147 1334 ntBASIC3.94□□□□□ -1.78
RHBDD3Q9Y3P4 ZNF137P-201ENST00000456718 1920 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 AC125257.1-201ENST00000560400 2930 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 U3.15-201ENST00000365398 212 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 RNU6-317P-201ENST00000384031 107 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 AC105402.1-201ENST00000413336 545 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 HMGB1P32-201ENST00000425971 565 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 AC092324.1-201ENST00000468671 324 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 RN7SL826P-201ENST00000479724 288 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 SYT14P1-201ENST00000481459 721 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 MTND4LP2-201ENST00000502312 285 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 PCNAP1-201ENST00000505363 709 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 AC016550.3-201ENST00000515706 767 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 ADAD1P2-201ENST00000588476 646 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 AL021707.7-201ENST00000607991 416 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 AC004825.2-201ENST00000616634 455 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 AC009237.17-201ENST00000618111 748 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 AC055839.1-201ENST00000634467 498 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 MTCO1P14-201ENST00000441695 1559 ntBASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.93□□□□□ -1.78
RHBDD3Q9Y3P4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 AC025031.4-201ENST00000621248 3271 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 AC092162.3-201ENST00000624511 1624 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 MTND4P26-201ENST00000415971 1359 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 SNORA71.2-201ENST00000364941 134 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 RNA5SP22-201ENST00000365393 109 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 MIR550A3-201ENST00000390735 95 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 RNU6-244P-201ENST00000391028 104 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 MIR298-201ENST00000401212 88 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 VN1R8P-201ENST00000407739 893 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 RN7SKP216-201ENST00000411050 312 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 RAD23BP1-201ENST00000421404 1227 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 AC007394.1-201ENST00000421941 531 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 AC006455.6-201ENST00000426192 893 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 AC083982.1-201ENST00000485679 344 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 AC010374.1-201ENST00000503762 1237 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 VWA8P1-201ENST00000510889 176 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 RNU6-491P-201ENST00000516099 110 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 OR5M2P-201ENST00000529003 936 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 AC069240.1-201ENST00000548774 375 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 FAM25E-202ENST00000608562 189 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 AC015726.3-201ENST00000624501 418 ntBASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.92□□□□□ -1.78
RHBDD3Q9Y3P4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
RHBDD3Q9Y3P4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
RHBDD3Q9Y3P4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RHBDD3Q9Y3P4 AL353743.4-201ENST00000422653 1547 ntBASIC3.91□□□□□ -1.78
RHBDD3Q9Y3P4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RHBDD3Q9Y3P4 AC021146.4-201ENST00000309229 279 ntBASIC3.91□□□□□ -1.78
RHBDD3Q9Y3P4 RNA5SP28-201ENST00000363841 119 ntBASIC3.91□□□□□ -1.78
RHBDD3Q9Y3P4 SNORA62.2-201ENST00000364672 152 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms