Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 OR5M12P-201ENST00000423388 929 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 HSPD1P12-201ENST00000429127 1069 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AL117351.1-201ENST00000438864 766 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AC244505.3-201ENST00000454598 187 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 HSPE1P22-201ENST00000456856 327 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AC005410.1-202ENST00000460347 485 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AC021660.1-201ENST00000465006 554 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AC006463.2-201ENST00000473326 348 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AC010486.2-201ENST00000505572 483 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 RPS27AP18-201ENST00000515536 459 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 IGHV3-63-201ENST00000518422 341 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 SNORD39.2-201ENST00000579995 76 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 ZNF92P3-201ENST00000596594 954 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AC124856.1-201ENST00000600819 896 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AC087283.1-201ENST00000604029 1074 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AL139344.1-201ENST00000605228 195 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AL008729.2-201ENST00000606393 473 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AC007349.4-201ENST00000608114 532 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 OR1S1-201ENST00000624470 978 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AL512506.2-201ENST00000624472 458 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 RNA5SP27-201ENST00000363839 119 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 Y_RNA.472-201ENST00000384322 102 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 SNORD65C-201ENST00000390962 71 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 RNU6-1242P-201ENST00000391052 103 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 MCTS2P-201ENST00000394552 546 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AC136624.1-201ENST00000400791 413 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 COX5BP7-201ENST00000414780 274 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 GTF2IP2-201ENST00000424290 697 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 CASP3P1-201ENST00000446037 609 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AL354714.3-201ENST00000447284 493 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AL050341.1-201ENST00000447743 313 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 RBMY2TP-201ENST00000451162 947 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 GYG1P1-201ENST00000460864 698 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 CDH12P2-201ENST00000504393 298 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AC016559.2-201ENST00000510759 359 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AC021006.3-201ENST00000530771 192 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AL109741.3-201ENST00000561748 592 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AC009117.1-201ENST00000563948 554 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 MTND4LP24-201ENST00000572277 291 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 MIR4330-201ENST00000579077 105 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AC096586.1-201ENST00000610267 561 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AC092106.3-201ENST00000611308 722 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AC087385.3-201ENST00000620477 187 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX2IPQ9Y2D8 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms