Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 FAM35DP-201ENST00000323387 2712 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AL356317.1-201ENST00000396110 1436 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AC019155.1-201ENST00000382242 574 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 GAPDHP49-201ENST00000421421 961 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 IPMKP1-201ENST00000425988 855 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 RPS27AP17-201ENST00000463344 455 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 RN7SL205P-201ENST00000490174 284 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AC017037.1-201ENST00000508460 471 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 RNU6-319P-201ENST00000516025 108 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 SEC11B-201ENST00000518383 499 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AC079587.1-201ENST00000603846 277 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AC022387.2-201ENST00000604050 448 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AC012603.1-201ENST00000606424 528 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AC012409.3-201ENST00000611343 981 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AC078899.5-201ENST00000612475 178 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AC020658.4-201ENST00000613987 684 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 RN7SL722P-201ENST00000617780 284 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 RN7SL565P-201ENST00000618246 284 ntBASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 RNU6-618P-201ENST00000363518 112 ntBASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AC069213.2-201ENST00000420238 366 ntBASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 RPS27AP7-201ENST00000422792 455 ntBASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 RPEP3-201ENST00000425462 676 ntBASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 CNOT7P1-201ENST00000429006 852 ntBASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 RPL7P28-201ENST00000437739 740 ntBASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AC099063.2-201ENST00000446360 662 ntBASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AL592156.1-201ENST00000508758 304 ntBASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AC104997.1-201ENST00000519761 717 ntBASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 NPM1P6-201ENST00000521088 871 ntBASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 RPL23AP97-201ENST00000568955 471 ntBASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 RPL12P25-202ENST00000598100 674 ntBASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AC012213.4-201ENST00000606457 354 ntBASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AC007546.2-201ENST00000623996 360 ntBASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 AC083899.2-201ENST00000423285 1376 ntBASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.98□□□□□ -1.77
TRAPPC4Q9Y296 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 MAPK10-304ENST00000641341 3984 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 OR5P1P-201ENST00000299512 925 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 AC083799.1-201ENST00000366451 910 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 MIR7-1-201ENST00000384871 110 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 RNA5SP332-201ENST00000391063 115 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 SNORA11F-201ENST00000408237 128 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 AC092647.1-201ENST00000420654 287 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 AC011998.1-201ENST00000433403 117 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 UBE2V1P3-201ENST00000439651 417 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms