Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC005261.2-201ENST00000593427 4258 ntBASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 SPATA31D2P-201ENST00000429999 4388 ntBASIC6.09□□□□□ -1.44
SHANK2Q9UPX8 U8.11-201ENST00000384699 133 ntBASIC6.09□□□□□ -1.44
SHANK2Q9UPX8 U8.12-201ENST00000384701 133 ntBASIC6.09□□□□□ -1.44
SHANK2Q9UPX8 AL450992.3-201ENST00000413192 568 ntBASIC6.09□□□□□ -1.44
SHANK2Q9UPX8 PDSS1P2-201ENST00000449397 678 ntBASIC6.09□□□□□ -1.44
SHANK2Q9UPX8 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC6.09□□□□□ -1.44
SHANK2Q9UPX8 U8.18-201ENST00000459285 133 ntBASIC6.09□□□□□ -1.44
SHANK2Q9UPX8 AC008694.2-201ENST00000517591 306 ntBASIC6.09□□□□□ -1.44
SHANK2Q9UPX8 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SHANK2Q9UPX8 AC090312.1-201ENST00000580637 348 ntBASIC6.09□□□□□ -1.44
SHANK2Q9UPX8 MIR5195-201ENST00000583555 115 ntBASIC6.09□□□□□ -1.44
SHANK2Q9UPX8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.09□□□□□ -1.44
SHANK2Q9UPX8 AL354798.1-201ENST00000622505 329 ntBASIC6.09□□□□□ -1.44
SHANK2Q9UPX8 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SHANK2Q9UPX8 ZNF285B-201ENST00000561698 1767 ntBASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 LINC00561-201ENST00000565815 2738 ntBASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 RNA5SP399-201ENST00000364003 117 ntBASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 SNORA5A-201ENST00000384111 134 ntBASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 CYCSP32-201ENST00000440548 321 ntBASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 ARL4AP3-201ENST00000441452 574 ntBASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 PRDX3P3-201ENST00000447765 522 ntBASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 PPIAP15-201ENST00000479662 484 ntBASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 AC026782.2-201ENST00000510845 636 ntBASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 DUX4L52-201ENST00000549363 777 ntBASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 AC005000.2-201ENST00000605468 310 ntBASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 CCT7-217ENST00000626868 249 ntTSL 5 BASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 U6.105-201ENST00000637379 88 ntBASIC6.08□□□□□ -1.44
SHANK2Q9UPX8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 ATP5F1P4-201ENST00000397288 746 ntBASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 RPS23P10-201ENST00000416185 486 ntBASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 RPS20P21-201ENST00000466859 343 ntBASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 AC012158.1-204ENST00000483430 465 ntBASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 RNU7-143P-201ENST00000516781 65 ntBASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 NDUFA5P2-201ENST00000519723 344 ntBASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 MTND1P6-201ENST00000523621 946 ntBASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 AC138907.10-201ENST00000623708 983 ntBASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 MAPK10-320ENST00000641462 6696 ntBASIC6.07□□□□□ -1.44
SHANK2Q9UPX8 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 AL672167.1-203ENST00000641299 2975 ntBASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 OR4A15-201ENST00000314706 1035 ntBASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 RNA5SP72-201ENST00000364442 117 ntBASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 AC091516.1-201ENST00000549191 703 ntBASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHANK2Q9UPX8 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 TPT1P1-201ENST00000458495 518 ntBASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 RPS4XP15-201ENST00000489210 795 ntBASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 AC098799.1-201ENST00000504752 800 ntBASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 AC074250.1-201ENST00000511117 192 ntBASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHANK2Q9UPX8 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms