Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
APOBEC3BQ9UH17 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.33□□□□□ -1.72
APOBEC3BQ9UH17 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.33□□□□□ -1.72
APOBEC3BQ9UH17 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.33□□□□□ -1.72
APOBEC3BQ9UH17 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.33□□□□□ -1.72
APOBEC3BQ9UH17 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 OR51C1P-202ENST00000641159 1444 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AL589826.1-201ENST00000340697 249 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 Y_RNA.126-201ENST00000363382 111 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 RNU1-132P-201ENST00000364300 164 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 RNA5SP151-201ENST00000365632 117 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 OR13C3-201ENST00000374781 1108 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 SNORD96B-201ENST00000386148 79 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 MIR921-201ENST00000401133 56 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AL139039.2-201ENST00000407436 479 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 SNORA11F-201ENST00000408237 128 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 RPS20P14-201ENST00000412545 360 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 RPL21P91-201ENST00000429231 479 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 RPL23AP52-201ENST00000439311 478 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 RN7SL812P-201ENST00000493791 279 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AC087272.1-201ENST00000523624 533 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AP003730.1-201ENST00000524605 285 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 TRAV8-5-201ENST00000537369 341 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AC008966.2-201ENST00000606157 453 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AC004241.3-201ENST00000611728 517 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 MIR6891-201ENST00000618788 93 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AL451142.2-201ENST00000429076 2090 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 NXPH1-205ENST00000602349 1953 ntBASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
APOBEC3BQ9UH17 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 AC126323.6-202ENST00000568092 3511 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 AC139713.2-215ENST00000641428 5037 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 RNA5SP28-201ENST00000363841 119 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 RNU1-63P-201ENST00000383902 164 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 RNU6-152P-201ENST00000384037 107 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 SNORA11-201ENST00000408789 128 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 RPL23AP25-201ENST00000430973 463 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 AC114495.1-201ENST00000441274 436 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 CASP3P1-201ENST00000446037 609 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 AL354710.1-201ENST00000453641 246 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 AC089999.1-201ENST00000460336 374 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 RPS20P4-201ENST00000461659 355 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 BNIP3P5-201ENST00000562290 498 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 AC021483.2-201ENST00000567415 758 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 HMGB2P1-201ENST00000591146 634 ntBASIC4.31□□□□□ -1.72
APOBEC3BQ9UH17 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms