Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS29Q9UBQ0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
VPS29Q9UBQ0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS29Q9UBQ0 Z82217.1-201ENST00000625157 8149 ntBASIC3.97□□□□□ -1.77
VPS29Q9UBQ0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS29Q9UBQ0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
VPS29Q9UBQ0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
VPS29Q9UBQ0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
VPS29Q9UBQ0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 HSPD1P11-201ENST00000508643 1702 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 RNU4-39P-201ENST00000362455 127 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 RNU6-984P-201ENST00000363236 109 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 RNA5SP366-201ENST00000365454 123 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 PGBD4P8-201ENST00000412993 562 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AC004552.1-201ENST00000419089 348 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AC099336.2-201ENST00000422457 254 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AC009480.2-201ENST00000422916 432 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AC023141.6-201ENST00000429418 337 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 GSTA7P-201ENST00000438425 448 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AC099560.2-201ENST00000457554 255 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 RPS26P3-201ENST00000470205 348 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 RN7SL738P-201ENST00000470264 297 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AC090543.2-201ENST00000483963 348 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AC004057.1-201ENST00000485827 348 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AC093824.1-201ENST00000508796 343 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 OR51K1P-201ENST00000510214 950 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AC099522.1-202ENST00000514718 367 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AC007599.1-201ENST00000568688 1174 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 RPL23AP87-202ENST00000573039 466 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AC022655.2-201ENST00000577280 318 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 MIR5096-201ENST00000583713 70 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 OR1AB1P-201ENST00000585564 761 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 VN1R81P-201ENST00000602085 372 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AC104662.1-201ENST00000604448 511 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AC090948.2-201ENST00000607363 564 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 AL121873.1-201ENST00000616013 524 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 MARK2P15-201ENST00000432204 2186 ntBASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
VPS29Q9UBQ0 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 AC012020.1-201ENST00000624541 1728 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 MTND4P26-201ENST00000415971 1359 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 U3.22-201ENST00000391120 215 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 JKAMPP1-201ENST00000413804 919 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 AL353597.2-202ENST00000434901 373 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 CASP3P1-201ENST00000446037 609 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 AL162388.1-201ENST00000450912 352 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 EIF4A1P11-201ENST00000451239 222 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 AC041039.1-201ENST00000485656 536 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 AC093840.1-201ENST00000511599 336 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 HNRNPKP5-201ENST00000515300 253 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 AC012417.1-201ENST00000582307 1039 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 AC090246.1-201ENST00000616499 426 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 AL121890.3-201ENST00000618494 516 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 AC233309.1-201ENST00000619522 751 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 AC095038.2-201ENST00000621464 1070 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 AC016588.2-201ENST00000632484 3021 ntBASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS29Q9UBQ0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 MT-RNR1-201ENST00000389680 954 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 AL161909.1-201ENST00000397390 712 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms