Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.24□□□□□ -1.57
HMG20BQ9P0W2 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.24□□□□□ -1.57
HMG20BQ9P0W2 HMGB1P51-201ENST00000605166 638 ntBASIC5.24□□□□□ -1.57
HMG20BQ9P0W2 AC010857.1-201ENST00000606398 594 ntBASIC5.24□□□□□ -1.57
HMG20BQ9P0W2 AC019131.2-201ENST00000609071 870 ntBASIC5.24□□□□□ -1.57
HMG20BQ9P0W2 AC068724.3-201ENST00000625906 87 ntBASIC5.24□□□□□ -1.57
HMG20BQ9P0W2 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.24□□□□□ -1.57
HMG20BQ9P0W2 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
HMG20BQ9P0W2 LARP1BP1-201ENST00000506036 1359 ntBASIC5.24□□□□□ -1.57
HMG20BQ9P0W2 AC005261.4-201ENST00000600047 1385 ntBASIC5.24□□□□□ -1.57
HMG20BQ9P0W2 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.24□□□□□ -1.57
HMG20BQ9P0W2 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMG20BQ9P0W2 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 AL592182.3-201ENST00000642132 3304 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 RNA5SP515-201ENST00000364570 118 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 SNORA70C-201ENST00000384538 135 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 RPS27AP11-201ENST00000402798 447 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 VN1R8P-201ENST00000407739 893 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 AL035696.2-201ENST00000407941 709 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 GTF2IP2-201ENST00000424290 697 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 AC073335.1-201ENST00000427776 363 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 ARL5AP3-201ENST00000439327 386 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 AC010374.1-201ENST00000503762 1237 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 OR7E10P-201ENST00000526420 991 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 AL352979.3-201ENST00000553515 247 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 AL109766.1-201ENST00000555080 552 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 RN7SL600P-201ENST00000581811 299 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 SS18L2P2-201ENST00000583960 235 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 MIR7154-201ENST00000620673 73 ntBASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMG20BQ9P0W2 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 AC107027.3-201ENST00000565095 3473 ntBASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 AC067945.1-201ENST00000342609 618 ntBASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 RNU4-44P-201ENST00000363050 141 ntBASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 AL356967.1-201ENST00000406305 431 ntBASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 MIR1911-201ENST00000410783 80 ntBASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 AL132765.1-201ENST00000434165 553 ntBASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 AP000936.3-201ENST00000438127 255 ntBASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 ABCF2P2-201ENST00000450549 296 ntBASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 RPS26P28-201ENST00000470806 348 ntBASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 OR4V1P-201ENST00000525394 1140 ntBASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 TVP23BP1-201ENST00000557500 617 ntBASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 BMS1P7-201ENST00000602440 1052 ntBASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 AC096553.1-201ENST00000605169 829 ntBASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 AC023813.4-201ENST00000607580 580 ntBASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 AL356274.1-201ENST00000617064 410 ntBASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 AC008013.2-202ENST00000637965 364 ntBASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMG20BQ9P0W2 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HMG20BQ9P0W2 AC005332.5-201ENST00000591222 2919 ntBASIC5.21□□□□□ -1.57
HMG20BQ9P0W2 AL034403.1-201ENST00000399414 885 ntBASIC5.21□□□□□ -1.58
HMG20BQ9P0W2 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.21□□□□□ -1.58
HMG20BQ9P0W2 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.21□□□□□ -1.58
HMG20BQ9P0W2 RPL23AP38-201ENST00000423801 469 ntBASIC5.21□□□□□ -1.58
HMG20BQ9P0W2 RPS27AP12-201ENST00000429552 465 ntBASIC5.21□□□□□ -1.58
HMG20BQ9P0W2 AC022022.1-201ENST00000430304 178 ntBASIC5.21□□□□□ -1.58
HMG20BQ9P0W2 BTF3P10-201ENST00000433415 495 ntBASIC5.21□□□□□ -1.58
HMG20BQ9P0W2 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.21□□□□□ -1.58
HMG20BQ9P0W2 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.21□□□□□ -1.58
HMG20BQ9P0W2 RNA5SP73-201ENST00000516744 108 ntBASIC5.21□□□□□ -1.58
HMG20BQ9P0W2 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.21□□□□□ -1.58
HMG20BQ9P0W2 PHBP17-201ENST00000528576 541 ntBASIC5.21□□□□□ -1.58
HMG20BQ9P0W2 TOMM20P2-201ENST00000540082 421 ntBASIC5.21□□□□□ -1.58
HMG20BQ9P0W2 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms