Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 RPL5P24-201ENST00000463742 885 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 RPL7P16-201ENST00000479738 738 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 OR5H4P-201ENST00000510851 923 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 OR5BM1P-201ENST00000512021 366 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 MTCO3P28-201ENST00000513351 515 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC022360.1-201ENST00000521058 340 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC092709.1-201ENST00000521355 1045 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC008033.2-201ENST00000542626 177 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 CR383656.6-201ENST00000550518 394 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC008015.1-201ENST00000555505 465 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 DUXAP1-201ENST00000556632 463 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC090751.1-201ENST00000566966 267 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC079171.1-201ENST00000568788 914 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC040904.1-201ENST00000590850 223 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC010620.1-201ENST00000601088 1102 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC121761.2-201ENST00000617300 689 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC018926.3-201ENST00000618841 406 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC074140.1-201ENST00000621617 208 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 CDRT1-208ENST00000630868 794 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 MIR4278-201ENST00000636094 69 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AL513185.3-201ENST00000433335 1300 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 ASNSP1-204ENST00000641977 1664 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
VTA1Q9NP79 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VTA1Q9NP79 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VTA1Q9NP79 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
VTA1Q9NP79 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VTA1Q9NP79 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VTA1Q9NP79 AC005539.1-201ENST00000443768 1479 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VTA1Q9NP79 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VTA1Q9NP79 CASC19-221ENST00000641309 1382 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VTA1Q9NP79 RN7SKP95-201ENST00000362860 303 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VTA1Q9NP79 RN7SKP114-201ENST00000410327 279 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 MORF4L1P6-201ENST00000418771 268 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 OR2AM1P-201ENST00000422137 422 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 AL031663.1-201ENST00000437445 219 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 AP000936.3-201ENST00000438127 255 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 CBX1P4-201ENST00000439415 457 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 AL359265.1-201ENST00000440296 795 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 RPS26P30-201ENST00000443431 335 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 HMGB1P4-201ENST00000455362 567 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 RPL23AP71-201ENST00000470966 469 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 AC108734.3-201ENST00000481241 1165 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 RPS24P16-201ENST00000497294 392 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 WBP1LP4-201ENST00000505043 344 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 AC020937.1-201ENST00000519677 1013 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 AC138832.1-201ENST00000522871 556 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 VN1R82P-201ENST00000601481 356 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 AL390838.2-201ENST00000602394 274 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 AC023158.2-201ENST00000614876 543 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 AC007671.2-201ENST00000637344 619 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 AC010329.2-201ENST00000595195 2737 ntBASIC5.86□□□□□ -1.47
VTA1Q9NP79 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VTA1Q9NP79 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.86□□□□□ -1.47
VTA1Q9NP79 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VTA1Q9NP79 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VTA1Q9NP79 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.85□□□□□ -1.47
VTA1Q9NP79 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms