Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 RNU1-20P-201ENST00000363314 162 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 RNU5B-4P-201ENST00000363508 111 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC234772.1-201ENST00000377927 937 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 RNU6-207P-201ENST00000384137 107 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 MT-TP-201ENST00000387461 68 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 RNU1-82P-201ENST00000390851 165 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC104297.1-201ENST00000393779 870 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AL590609.2-201ENST00000421430 368 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC004074.1-201ENST00000421810 1063 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 PNRC2P1-201ENST00000423940 420 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 RPL21P43-201ENST00000425440 472 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 NRBF2P3-201ENST00000432731 865 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC008072.1-201ENST00000434254 824 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 RRM2P4-201ENST00000441721 562 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 CYCSP42-201ENST00000450823 238 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC079168.2-201ENST00000453977 416 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC092324.1-201ENST00000468671 324 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 RPL21P6-201ENST00000479171 504 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 RN7SL817P-201ENST00000480777 288 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 RN7SL809P-201ENST00000482040 297 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 ARL4AP1-201ENST00000503220 705 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC021146.3-201ENST00000511911 260 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 TCP11X3P-202ENST00000514289 1254 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC026407.1-201ENST00000518369 204 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 MTND2P32-201ENST00000521584 1038 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC010376.1-201ENST00000522101 334 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC010735.1-201ENST00000567305 1026 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC007448.1-201ENST00000582714 234 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 MIR4737-201ENST00000583979 81 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AL606834.3-201ENST00000602615 496 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AL512782.1-201ENST00000603093 364 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC099785.1-201ENST00000605697 437 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AL078595.3-201ENST00000623815 1166 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AL355852.1-201ENST00000454081 1771 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH9Q9HC56 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 IL6STP1-201ENST00000346911 1020 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 RNA5SP372-201ENST00000390836 115 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 VN1R51P-201ENST00000411675 945 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AC093422.3-201ENST00000428506 305 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AL009048.1-201ENST00000450437 298 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AC005008.1-201ENST00000456151 612 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AC090142.1-201ENST00000465776 462 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 RPL23AP65-201ENST00000475608 468 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AC083982.1-201ENST00000485679 344 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 RNU6-276P-201ENST00000516114 96 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 RNA5SP228-201ENST00000516232 133 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AC106734.1-201ENST00000568646 663 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AC012254.4-201ENST00000588843 273 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 HMGB2P1-201ENST00000591146 634 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AC006116.5-201ENST00000591936 559 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PCDH9Q9HC56 RPL7P50-201ENST00000600588 727 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AC024940.4-201ENST00000605507 246 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 AC091979.2-201ENST00000607514 214 ntBASIC4.81□□□□□ -1.64
PCDH9Q9HC56 FAM25E-202ENST00000608562 189 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms