Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 PPBPP1-201ENST00000510807 373 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AC025175.1-201ENST00000606482 759 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AL596275.2-204ENST00000641628 552 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AL596275.2-206ENST00000641957 626 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 OR51C1P-202ENST00000641159 1444 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AC090017.1-201ENST00000548612 1779 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AC139713.2-214ENST00000642059 1811 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AC009313.2-201ENST00000417893 1941 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 AC009229.4-201ENST00000623854 1947 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 AC025031.4-201ENST00000621248 3271 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 RNA5SP447-201ENST00000363749 119 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 DHFRP5-201ENST00000406944 564 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 RPL6P29-201ENST00000414863 865 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 AL512504.1-201ENST00000415494 778 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 AC073136.2-201ENST00000417282 849 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 TRGV6-201ENST00000417928 299 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 RPL12P34-201ENST00000424532 479 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 RPS26P47-201ENST00000427219 348 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 DYNLL1P7-201ENST00000429273 258 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 Z95152.1-201ENST00000453556 656 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 MTND2P28-201ENST00000457540 1044 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 AC021146.7-201ENST00000509604 775 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 RNU6-491P-201ENST00000516099 110 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 AC104997.1-201ENST00000519761 717 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 AC009643.1-201ENST00000532030 391 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 AC006064.5-201ENST00000541782 248 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 AC074029.2-201ENST00000551045 634 ntBASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.85□□□□□ -1.63
CCSER1Q9C0I3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AC093535.2-201ENST00000624769 2326 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AC018529.3-201ENST00000624212 2254 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AC126755.2-208ENST00000327792 462 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AC138969.1-213ENST00000331436 462 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AC019155.1-201ENST00000382242 574 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AL035696.2-201ENST00000407941 709 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 RPS23P10-201ENST00000416185 486 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 EIF1P3-201ENST00000423841 334 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AL157831.1-201ENST00000426134 473 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AC016712.1-201ENST00000431088 378 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 MTCO1P57-201ENST00000432182 261 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AL353597.2-202ENST00000434901 373 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 RPL23AP52-201ENST00000439311 478 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 MTCYBP12-201ENST00000440559 1134 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AL512326.1-201ENST00000443050 721 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AC022795.1-201ENST00000473808 480 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 RN7SL810P-201ENST00000493031 276 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AC010374.1-201ENST00000503762 1237 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AC108145.1-201ENST00000503770 153 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AC002456.2-201ENST00000509356 380 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 RNA5SP73-201ENST00000516744 108 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AC010476.1-201ENST00000519111 851 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 MIR378J-201ENST00000611988 109 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms