Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RNA5SP391-201ENST00000363456 119 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 RNU4-91P-201ENST00000364778 135 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 Y_RNA.359-201ENST00000365498 102 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 RNU4-2-201ENST00000365668 141 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 RNU6-1293P-201ENST00000384077 107 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 RNU6-441P-201ENST00000384545 106 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 RNU2-16P-201ENST00000410712 136 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC004022.2-201ENST00000413824 193 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 CDK8P2-201ENST00000415020 547 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 RPS3AP44-201ENST00000425466 790 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AL512649.1-201ENST00000428997 581 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 ZYG11AP1-201ENST00000430329 837 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AL365184.2-201ENST00000431139 435 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC094019.1-201ENST00000434678 472 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 BMS1P10-201ENST00000443754 1120 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 VN1R10P-201ENST00000447106 875 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 IGBP1P3-201ENST00000447449 1000 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 RN7SL643P-201ENST00000471845 291 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC104109.1-201ENST00000498563 436 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 OR7E99P-201ENST00000505750 922 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 SNORA70.11-201ENST00000515987 138 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 SNORA70.13-201ENST00000516116 138 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 NMNAT1P1-201ENST00000554095 876 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC007599.1-201ENST00000568688 1174 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 MRPS21P8-201ENST00000569196 235 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC006115.2-201ENST00000596823 202 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AL096712.1-201ENST00000614561 159 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC099842.1-201ENST00000619919 596 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 RNU6-156P-201ENST00000621869 107 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC012414.7-202ENST00000622705 1090 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC024587.1-201ENST00000505925 2157 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 MTND4P16-201ENST00000466108 1367 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 RNU6-1119P-201ENST00000384349 108 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 AL390316.1-201ENST00000406279 553 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 ATG4AP1-201ENST00000416893 538 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 AC083875.1-201ENST00000419509 405 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 AL831737.1-201ENST00000441288 271 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 AL645936.1-201ENST00000441979 518 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 AC239809.1-201ENST00000450470 217 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 CFTRP1-201ENST00000456646 183 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 SETP20-201ENST00000457046 852 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 MTCO3P2-201ENST00000457365 171 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 RNA5SP269-201ENST00000459032 137 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 PDCL3P4-201ENST00000489621 720 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 FTH1P24-201ENST00000503502 462 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 AC018797.3-201ENST00000513388 1241 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 RN7SKP288-201ENST00000516227 268 ntBASIC5.98□□□□□ -1.45
TRIM55Q9BYV6 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms