Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 ATG4AP1-201ENST00000416893 538 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 REREP1Y-201ENST00000422655 198 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 FO393414.1-201ENST00000428697 1184 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AL359265.2-201ENST00000434367 631 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 MUPP-201ENST00000438111 566 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 THAP5P1-201ENST00000439089 262 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 REREP2Y-201ENST00000439103 200 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AC239798.3-201ENST00000454459 408 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AC091685.2-201ENST00000454924 864 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AC007016.1-201ENST00000512110 244 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AC007599.1-201ENST00000568688 1174 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 RN7SL652P-201ENST00000577769 300 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AC061975.8-201ENST00000587058 721 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AL139344.1-201ENST00000605228 195 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AC011815.3-201ENST00000624194 473 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 MTND4P4-201ENST00000439033 1366 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AL606490.7-201ENST00000433136 191 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AC084290.1-201ENST00000434995 374 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 MED6P1-201ENST00000439659 713 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 YWHAZP2-201ENST00000440317 728 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 RPS26P2-201ENST00000440331 348 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 RPL21P133-201ENST00000443666 476 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 Z80107.2-201ENST00000445127 392 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 MTCO2P7-201ENST00000446518 666 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 MTCO3P16-201ENST00000454456 754 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 SCARNA10-201ENST00000459255 330 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 RPL35AP28-201ENST00000459730 331 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AC126121.1-201ENST00000482313 553 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 RPS4XP18-201ENST00000495480 763 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 RPL21P131-201ENST00000497298 483 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 MTND4P2-201ENST00000507767 1203 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 NOP56P3-201ENST00000549457 385 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 MTND4P33-201ENST00000556706 766 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AC092868.3-201ENST00000560515 784 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AL109653.1-201ENST00000603091 248 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AL049536.1-201ENST00000625043 744 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AL672167.1-203ENST00000641299 2975 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AC083843.2-201ENST00000568248 6253 ntBASIC5.69□□□□□ -1.5
SALL3Q9BXA9 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SALL3Q9BXA9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms