Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RNU1-30P-201ENST00000606575 163 ntBASIC5.31□□□□□ -1.56
ABCA3Q99758 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.31□□□□□ -1.56
ABCA3Q99758 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.31□□□□□ -1.56
ABCA3Q99758 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.31□□□□□ -1.56
ABCA3Q99758 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
ABCA3Q99758 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
ABCA3Q99758 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
ABCA3Q99758 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.31□□□□□ -1.56
ABCA3Q99758 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ABCA3Q99758 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ABCA3Q99758 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
ABCA3Q99758 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ABCA3Q99758 RNA5SP267-201ENST00000364893 126 ntBASIC5.31□□□□□ -1.56
ABCA3Q99758 RN7SKP186-201ENST00000365371 303 ntBASIC5.31□□□□□ -1.56
ABCA3Q99758 RPS7P15-201ENST00000415804 584 ntBASIC5.31□□□□□ -1.56
ABCA3Q99758 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.31□□□□□ -1.56
ABCA3Q99758 AL591503.2-201ENST00000442314 1005 ntBASIC5.31□□□□□ -1.56
ABCA3Q99758 RPS17P13-201ENST00000448974 407 ntBASIC5.31□□□□□ -1.56
ABCA3Q99758 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.31□□□□□ -1.56
ABCA3Q99758 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.31□□□□□ -1.56
ABCA3Q99758 MIR5187-201ENST00000583479 76 ntBASIC5.31□□□□□ -1.56
ABCA3Q99758 SNX6P1-201ENST00000601728 1224 ntBASIC5.31□□□□□ -1.56
ABCA3Q99758 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.31□□□□□ -1.56
ABCA3Q99758 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.31□□□□□ -1.56
ABCA3Q99758 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
ABCA3Q99758 HSPD1P14-201ENST00000432666 1618 ntBASIC5.31□□□□□ -1.56
ABCA3Q99758 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ABCA3Q99758 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ABCA3Q99758 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ABCA3Q99758 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.3□□□□□ -1.56
ABCA3Q99758 AC083837.1-201ENST00000565297 2994 ntBASIC5.3□□□□□ -1.56
ABCA3Q99758 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
ABCA3Q99758 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.3□□□□□ -1.56
ABCA3Q99758 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.3□□□□□ -1.56
ABCA3Q99758 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.3□□□□□ -1.56
ABCA3Q99758 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.3□□□□□ -1.56
ABCA3Q99758 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.3□□□□□ -1.56
ABCA3Q99758 RNU1-103P-201ENST00000516502 125 ntBASIC5.3□□□□□ -1.56
ABCA3Q99758 RN7SKP83-201ENST00000516512 178 ntBASIC5.3□□□□□ -1.56
ABCA3Q99758 AC068993.1-201ENST00000546724 589 ntBASIC5.3□□□□□ -1.56
ABCA3Q99758 AL359219.2-201ENST00000555184 348 ntBASIC5.3□□□□□ -1.56
ABCA3Q99758 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.3□□□□□ -1.56
ABCA3Q99758 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.3□□□□□ -1.56
ABCA3Q99758 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.3□□□□□ -1.56
ABCA3Q99758 ELOCP35-201ENST00000604289 336 ntBASIC5.3□□□□□ -1.56
ABCA3Q99758 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
ABCA3Q99758 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
ABCA3Q99758 MTCO1P12-201ENST00000414273 1543 ntBASIC5.3□□□□□ -1.56
ABCA3Q99758 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.3□□□□□ -1.56
ABCA3Q99758 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ABCA3Q99758 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ABCA3Q99758 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.29□□□□□ -1.56
ABCA3Q99758 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ABCA3Q99758 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ABCA3Q99758 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ABCA3Q99758 ATP5A1P2-201ENST00000412323 255 ntBASIC5.29□□□□□ -1.56
ABCA3Q99758 RPS29P4-201ENST00000414733 161 ntBASIC5.29□□□□□ -1.56
ABCA3Q99758 Z74696.2-201ENST00000436514 498 ntBASIC5.29□□□□□ -1.56
ABCA3Q99758 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.29□□□□□ -1.56
ABCA3Q99758 RPL7P24-201ENST00000493052 752 ntBASIC5.29□□□□□ -1.56
ABCA3Q99758 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.29□□□□□ -1.56
ABCA3Q99758 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.29□□□□□ -1.56
ABCA3Q99758 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.29□□□□□ -1.56
ABCA3Q99758 AL137843.1-201ENST00000605078 385 ntBASIC5.29□□□□□ -1.56
ABCA3Q99758 AC005972.3-201ENST00000606304 481 ntBASIC5.29□□□□□ -1.56
ABCA3Q99758 AC064801.1-201ENST00000612025 407 ntBASIC5.29□□□□□ -1.56
ABCA3Q99758 AC006971.1-201ENST00000407916 4486 ntBASIC5.29□□□□□ -1.56
ABCA3Q99758 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ABCA3Q99758 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
ABCA3Q99758 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ABCA3Q99758 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ABCA3Q99758 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
ABCA3Q99758 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ABCA3Q99758 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
ABCA3Q99758 AL161631.1-201ENST00000417933 486 ntBASIC5.28□□□□□ -1.56
ABCA3Q99758 BX510359.1-201ENST00000456973 237 ntBASIC5.28□□□□□ -1.56
ABCA3Q99758 RN7SL601P-201ENST00000471221 293 ntBASIC5.28□□□□□ -1.56
ABCA3Q99758 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.28□□□□□ -1.56
ABCA3Q99758 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.28□□□□□ -1.56
ABCA3Q99758 AC022968.1-201ENST00000567372 442 ntBASIC5.28□□□□□ -1.56
ABCA3Q99758 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.28□□□□□ -1.56
ABCA3Q99758 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ABCA3Q99758 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ABCA3Q99758 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.28□□□□□ -1.56
ABCA3Q99758 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ABCA3Q99758 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ABCA3Q99758 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
ABCA3Q99758 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ABCA3Q99758 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
ABCA3Q99758 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ABCA3Q99758 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ABCA3Q99758 OR6K3-202ENST00000368146 996 ntBASIC5.28□□□□□ -1.56
ABCA3Q99758 SOD2P1-201ENST00000396543 562 ntBASIC5.28□□□□□ -1.56
ABCA3Q99758 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.28□□□□□ -1.56
ABCA3Q99758 RPL36AP10-201ENST00000421785 322 ntBASIC5.28□□□□□ -1.56
ABCA3Q99758 AC083899.2-201ENST00000423285 1376 ntBASIC5.28□□□□□ -1.56
ABCA3Q99758 FABP3P2-201ENST00000453169 399 ntBASIC5.28□□□□□ -1.56
ABCA3Q99758 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.28□□□□□ -1.56
ABCA3Q99758 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.28□□□□□ -1.56
ABCA3Q99758 RN7SKP13-201ENST00000515933 244 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms